Query= MSMg01no413_i17.b1 MSMg01no413_i17.b1 CHROMAT_FILE:
MSMg01no413_i17.b1 PHD_FILE: MSMg01no413_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:15 2005
(558 letters)
>mm_chr15_53901068_53902024
Length = 957
Score = 971 bits (502), Expect = 0.0
Identities = 544/558 (97%), Gaps = 1/558 (0%)
Strand = Plus / Minus
Query: 1 ctcgctgccaaggcatggacacctcaagcctccctggtaaagacaggctcctggtgttaa 60
|||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||
Sbjct: 757 ctcgctgccaaggcatggactccgcaagcctccctggtaaagaccggctcctggtgttaa 698
Query: 61 gtgcctactgccaaaacgcagtgtagtgtgactgccatctgctggcagggctctggcatt 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 697 gtgcctactgccaaaacgcagtgtggtgtgactgccatctgctggcagggctctggcatt 638
Query: 121 acagaatgggctaccatgcgctttcttggatgaagcactcctttgcaaaacataagcttt 180
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 637 acagaatgggctaccatgaactttcttggctgaagcactcctttgcaaaacataagc-tt 579
Query: 181 tttctggagaaataaaagacccagtttgatcataaattttgtccacattcaacaccaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tttctggagaaataaaagacccagtttgatcataaattttgtccacattcaacaccaaaa 519
Query: 241 tccccatgcattttgagaaagaactacagaatcagtagaagattgattctggattgtggt 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tccccatgcattttgaggaagaactacagaatcagtagaagattgattctggattgtggt 459
Query: 301 gtgctttccaattctaaatccagtgaaacaatgggttgttagctactaaccccctattct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 458 gtgctttccaattctaaatccagtgaaacaatgggttgttagctactaaccccctatttt 399
Query: 361 catcagctactaagttccctcagcataagcccagaagtagtgctgattccgagagttctt 420
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 398 catcagctactaagttccctcagcaaaagcccagaagcagtgctgattccgagagttctt 339
Query: 421 gcgctatgaaggccatcaagagctaaatcacttgtcgtcttcctcatcagccatcactat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gcgctatgaaggccatcaagagctaaatcacttgtcgtcttcctcatcagccatcactat 279
Query: 481 aaaaaaaaatcgtttctccttaagagaagattgtgtttcttagaacccaaataacaaaac 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 taaaaaaaatcgtttctccttaagagaagattgtgtttcttagaacccaaataacaaaac 219
Query: 541 attaagcattgcagttta 558
||||||||||| ||||||
Sbjct: 218 attaagcattgaagttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 957
Length adjustment: 10
Effective length of query: 548
Effective length of database: 947
Effective search space: 518956
Effective search space used: 518956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_i17.g1 MSMg01no413_i17.g1 CHROMAT_FILE:
MSMg01no413_i17.g1 PHD_FILE: MSMg01no413_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:15 2005
(468 letters)
>mm_chr15_53723220_53724087
Length = 868
Score = 874 bits (452), Expect = 0.0
Identities = 464/468 (99%)
Strand = Plus / Plus
Query: 1 actatgtaaaccagctggcctcaaattcacagagatccacatgcctctgtctcccaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actatgtaaaccagctggcctcaaattcacagagatccacatgcctctgtctcccaagtt 260
Query: 61 ctgggattaaaggcatggaccactacacatggctagagcatgaatccttgattgaactaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 ctgggattaaaggcatggaccactacacatggctagagcatgaatccttgattgaactga 320
Query: 121 ttaataaccaggagggaaagtctcaatgaccctagaactgtctataccactgggtgccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaataaccaggagggaaagtctcaatgaccctagaactgtctataccactgggtgccat 380
Query: 181 taatgaggtacaacatatagaaggcacgtaagtatccattatcaaacaaaaataccaatt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 taatgaggtacaacatatagaaggcacgtaagtatccattatcaaagaaaaataccaatt 440
Query: 241 atcagtaattacaggctggatgaatttggataccaggatgggcaaaccatggcaataaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcagtaattacaggctggatgaatttggataccaggatgggcaaaccatggcaataaaa 500
Query: 301 gccaagacgcagtgttctatatgaacagatacaaatgcatagtgatcaatctaggctcac 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 gccaagacgcagtgttctatatgaacagatacaaatgcatagtgatcgatctaggctcac 560
Query: 361 aaaaattagagacttactccaacaacttagaagaaatgtctgtaagaaagagtacaatta 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 aaaaattagagacttactccaacaacttagaagaaatgtctgtaagaaagagcacaatta 620
Query: 421 atatcttatttttatactgtccatcataaatcactaaggtttctaaaa 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatcttatttttatactgtccatcataaatcactaaggtttctaaaa 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
