Query= MSMg01no414_e14.b1 MSMg01no414_e14.b1 CHROMAT_FILE:
MSMg01no414_e14.b1 PHD_FILE: MSMg01no414_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:16 2005
(454 letters)
>mm_chr15_31169217_31170071
Length = 855
Score = 727 bits (376), Expect = 0.0
Identities = 433/452 (95%), Gaps = 3/452 (0%)
Strand = Plus / Plus
Query: 5 gaattctttcatct-ttcatccgtctgaaaa-gtattttctgtgctttaactttgaaaag 62
|||||||||||||| || ||| | ||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcatctctt-atctgcctgaaaatgtattttctgtgctttaactttgaaaag 263
Query: 63 atggtgcgtttgttagcctccctgtcaccgtgaccgagcacatgacataaacaacgtaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atggtgcgtttgttagcctccctgtcaccgtgaccgagcacatgacataaacaacgtaaa 323
Query: 123 aggagaggtttgtgcagtgcttgcggcacggtgtgctcgctcagccccatgcttgggctg 182
||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| |
Sbjct: 324 aggagaggtctgtgcagtgcttgcgggacgatgtgctcgctcagccccatgcttgggcag 383
Query: 183 cacgctgtgttagaggagcctgctgatggaggatgggcaggaagtggagggagctgtgaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cacgctgtgttagaggagcctgctgatggaggatgggcaggaagtggagggagctgtgaa 443
Query: 243 ccatggctgtggtaccgtccctgtgctggctttgttttctttccttctgtctcatggctg 302
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 444 ccatggctgtggtaccgtccctgtgctggctttgtagcctttccttctgactcatggctg 503
Query: 303 ctgtgatacgggtccctgttctgccacgccctcccctcgctgatgaactgagctttcaaa 362
| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccatgatacgggtccctgtcctgccacgccctcccctcgctgatgaactgagctttcaaa 563
Query: 363 actgcaacaaaatccatctttcattcagtttttttctggaaagtgtttgtcggtaggagg 422
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 564 actgcaacaaaatccatctttcattcagtttttttctggaaagtgtttgtcagtaggagg 623
Query: 423 gcagtagcccccatcagtcagctcttcctcag 454
|||||||||||| | |||||||||||||||||
Sbjct: 624 gcagtagcccccgtgagtcagctcttcctcag 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 855
Length adjustment: 10
Effective length of query: 444
Effective length of database: 845
Effective search space: 375180
Effective search space used: 375180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_e14.g1 MSMg01no414_e14.g1 CHROMAT_FILE:
MSMg01no414_e14.g1 PHD_FILE: MSMg01no414_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:17 2005
(251 letters)
>mm_chr15_31360113_31360763
Length = 651
Score = 476 bits (246), Expect = e-139
Identities = 249/250 (99%)
Strand = Plus / Minus
Query: 1 tctcttgttctacacagctgacactcatttattgcaaagggactcctcaaaggtcactca 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tctcttgttctacacagctggcactcatttattgcaaagggactcctcaaaggtcactca 391
Query: 61 gaggcaagcctctttacagagaaggcatgtggacagcacttgaacttatattaaaatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaggcaagcctctttacagagaaggcatgtggacagcacttgaacttatattaaaatact 331
Query: 121 tttatgggccagatcctgggtcaagaaagagctttgcatgccactgagttctcacactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tttatgggccagatcctgggtcaagaaagagctttgcatgccactgagttctcacactca 271
Query: 181 gagattcctgtcaccacattttatggataaagacacatctccttgtccaagttcatttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gagattcctgtcaccacattttatggataaagacacatctccttgtccaagttcatttgg 211
Query: 241 ttaaaacagg 250
||||||||||
Sbjct: 210 ttaaaacagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
