NNNNAAATTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCCTATGTAATTCATGTTTACAGAAACAGCTGGCCTAT
ATTTTATGTCAGTAGAATCATGAAATCTTTATGTTGTTTCTGAAAAAGAA
AAAGCAATATTAAAAAAAATTCTCTAATTTTTTTAGGCTAGGTGACAGCT
GAACTATTTAACATATCAAAATTTTGAGATATAAAATATAATTGGGAATT
TAGATTGGACTGTTTTCTAAGAATTGATGATGATAGCCTTGTATGGCTTT
ATGCATACTCAAACTTAATATGCAGTTCTTAGCCCTCATTGCATCAACAT
TCACATGCTGGGAAGTCATAAGTCACAGGCAAGCCCATGCAAATTTTCTA
AGATTATGACAAAGCTGTGAACTGTGTCTAATTCATCATTCTACCATCTG
TTTAACATGGATTTATCACTAGTTACTGGCTTGTAGTAAGCAATCTTTAC
AATCTCTATTCATCCTGAACACTGATCTGTAAAGTCTCATGCACAGAGCC
TCGGCAGGACTTCCAGATCTCAGCCAGCACCAGACTTAATACAAATGCAA
TGCTGGGGAAAAAGAGATTTATATCCTGCTGTGGCCAAATTGTAGCTTGT
TGCTTTAACTTTCTTTCTAAATCTAATATTGCAAAGAGAACAGCTGTATG
GGTGATGTGCCACTTTCCTTATTAAACATGCTCAGATACATTTCTA

NAAAANCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTGGAATTTTTATGGGG
ATTGCATTAATTTTGTAGACTGATTTAGGCAAGATGACAATTTTTGCGAT
ATCAATCCTGCCAATCCTTGAGTATGGGAAATCTTTCCATTTTCTGAGAT
CTTTGTTTACTTTCTTCAGGGATTTGAATTCCTTTTCATACAGATGCTTG
CTTGGTTACAGAGACACCAACATACTTTATGTTATTTGTGACTATTGTGA
CTGTTGTAAATTTCCCTAATTTATTTCCCAGTCTGCTAATCAGTTGAGTA
GAACAAAGTTTTTTTTGTTGTTGTTGTTTGTTTGAGTTAATTTCATAGCC
AGTCACTTTGCTGAAGTTGTTTATCAGGTTTAGTGGGTCTGTGGTGGAAC
TTTTGGATCACTTCAGTATATTATCATTTCATCTGCAAATAGTGATATTT
TGACTTCTTCCTTTCCAGTTTGTTTTTTTTTTTTTTTGACCTCCTTTTGT
CTTCTAAGTGTTCTGGCTAGGACTTTGAGTATTATATTGAAAAGACCGGG
TGAGAGTAAGCAGCCCTGTCAAGTGGCTGATTTTAGGGGGAATGGTTCAA
GAACCTTTCCCTTTAATTTTGAGCTGGGAATTTGTGTGGCGGAAATGGCC
TTTTTATAATAGCAAGTTTGCGCCCTGAATCTTGGACCTTTTG

Query= MSMg01no414_e24.b1 MSMg01no414_e24.b1 CHROMAT_FILE:
MSMg01no414_e24.b1 PHD_FILE: MSMg01no414_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:18 2005
         (574 letters)



>mm_chr15_46667435_46668408
          Length = 974

 Score = 1071 bits (554), Expect = 0.0
 Identities = 566/570 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctatgtaattcatgtttacagaaacagctggcctatattttatgtcagtagaat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctatgtaattcatgtttacagaaacagctggcctatattttatgtcagtagaat 264

                                                                       
Query: 65  catgaaatctttatgttgtttctgaaaaagaaaaagcaatattaaaaaaaattctctaat 124
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 catgaaatctttatgttgtttctgcaaaagaaaaagcaatattaaaaaaaattctctaat 324

                                                                       
Query: 125 ttttttaggctaggtgacagctgaactatttaacatatcaaaattttgagatataaaata 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttttttaggctaggtgacagctgaactatttaacatatcaaaattttgagatataaaata 384

                                                                       
Query: 185 taattgggaatttagattggactgttttctaagaattgatgatgatagccttgtatggct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taattgggaatttagattggactgttttctaagaattgatgatgatagccttgtatggct 444

                                                                       
Query: 245 ttatgcatactcaaacttaatatgcagttcttagccctcattgcatcaacattcacatgc 304
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 ttatgcatactcaaacttaatatgcagttcttagccctcattgcatcaacgttcacatgc 504

                                                                       
Query: 305 tgggaagtcataagtcacaggcaagcccatgcaaattttctaagattatgacaaagctgt 364
           |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgggaaatcataagtctcaggcaagcccatgcaaattttctaagattatgacaaagctgt 564

                                                                       
Query: 365 gaactgtgtctaattcatcattctaccatctgtttaacatggatttatcactagttactg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaactgtgtctaattcatcattctaccatctgtttaacatggatttatcactagttactg 624

                                                                       
Query: 425 gcttgtagtaagcaatctttacaatctctattcatcctgaacactgatctgtaaagtctc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcttgtagtaagcaatctttacaatctctattcatcctgaacactgatctgtaaagtctc 684

                                                                       
Query: 485 atgcacagagcctcggcaggacttccagatctcagccagcaccagacttaatacaaatgc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgcacagagcctcggcaggacttccagatctcagccagcaccagacttaatacaaatgc 744

                                         
Query: 545 aatgctggggaaaaagagatttatatcctg 574
           ||||||||||||||||||||||||||||||
Sbjct: 745 aatgctggggaaaaagagatttatatcctg 774


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)