Query= MSMg01no415_b17.b1 MSMg01no415_b17.b1 CHROMAT_FILE:
MSMg01no415_b17.b1 PHD_FILE: MSMg01no415_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:23 2005
(360 letters)
>mm_chr15_35623074_35623833
Length = 760
Score = 688 bits (356), Expect = 0.0
Identities = 356/356 (100%)
Strand = Plus / Plus
Query: 5 gaattcacctttttacttatgccatgcttattctgacagtaaagatcaatagaagcatat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacctttttacttatgccatgcttattctgacagtaaagatcaatagaagcatat 264
Query: 65 atgataaaacttaaggcagaaataaagaattggaagtatctacaactgcacagtgcatgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgataaaacttaaggcagaaataaagaattggaagtatctacaactgcacagtgcatgc 324
Query: 125 ttgggtgtccatgcacttgagatataaaccatagttcactggtgtcacaggttgtggaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgggtgtccatgcacttgagatataaaccatagttcactggtgtcacaggttgtggaaa 384
Query: 185 tccagccctcttcctcaccatacatcagacatgctggtgtttttgtttgtatgtttgttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccagccctcttcctcaccatacatcagacatgctggtgtttttgtttgtatgtttgttt 444
Query: 245 ttaccagtgttatgaatacagctcatgttttcaagagttgtcaatctaaatgacaaatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttaccagtgttatgaatacagctcatgttttcaagagttgtcaatctaaatgacaaatga 504
Query: 305 attgtttcctagaactctcattttatgggtgtatggatacagccattgaaaaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attgtttcctagaactctcattttatgggtgtatggatacagccattgaaaaggat 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_b17.g1 MSMg01no415_b17.g1 CHROMAT_FILE:
MSMg01no415_b17.g1 PHD_FILE: MSMg01no415_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:23 2005
(428 letters)
>mm_chr15_35795039_35795867
Length = 829
Score = 752 bits (389), Expect = 0.0
Identities = 419/429 (97%), Gaps = 1/429 (0%)
Strand = Plus / Minus
Query: 1 ctgaattgatatattcaggaagaaagaaaactaagatgcaatccaggagaggagagtcca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 629 ctgaattgatatattcaggaagaaagaaaactaagatgtaatccaggagaggagagtcca 570
Query: 61 ctaggaaaggagaaaggctgagtgagtgagtggatgctgtctgttacattaaacccacac 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 569 ctaggaaaggagaaaggctgagtgagtgagtggacgctgtctgttacattaaacccacac 510
Query: 121 actaaaagtgccagagacttctctgtgaacggacacatttgttactcagtgacacacagc 180
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 509 actaaaagtgccagagacttctctgtgaatggacacatttgttactcagtgacacacaac 450
Query: 181 gttaaaagtaagt-agtgagggttgctcctgtgtttataactcaccctacagttgtgcac 239
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 449 gttaaaagtaagtgagtgagggttgctcctgtgtttataacttaccctacagttgtgcac 390
Query: 240 aatgctctaacgagaaactaaaaatgcaaacaactacaaaggtttttcccaaatcattgc 299
||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||
Sbjct: 389 aatgctctaacgagaaactaaaaattcaaacaactacaaagatttttcccaagtcattgc 330
Query: 300 actcattatagaaatttttaaggagggtaaaacattaagatgtaattcaaggtcaataag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 actcattatagaaatttttaaggagggtaaaacattaagatgtaattcaaggtcaataag 270
Query: 360 caagtggatatatattgatatgtcttaagcctataacttttacatatattaaaacatata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 caagtggatatatattgatatgtcttaagcctataacttttacatatattaaaacatata 210
Query: 420 ccatttatt 428
||||||||
Sbjct: 209 tcatttatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 829
Length adjustment: 9
Effective length of query: 419
Effective length of database: 820
Effective search space: 343580
Effective search space used: 343580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
