Query= MSMg01no415_h24.b1 MSMg01no415_h24.b1 CHROMAT_FILE:
MSMg01no415_h24.b1 PHD_FILE: MSMg01no415_h24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:54 2005
(462 letters)
>mm_chr15_3448982_3449843
Length = 862
Score = 853 bits (441), Expect = 0.0
Identities = 453/457 (99%)
Strand = Plus / Minus
Query: 5 gaattcaccagcttgacaagtttacgttcatgatcactatgatcactgtgtttaggctcc 64
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gaattcaccagcaagaaaagtttacgttcatgatcactatgatcactgtgtttaggctcc 544
Query: 65 tgtactgattatccttggcctgaagccactatgggaggaaatggtgttactgtagccctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgtactgattatccttggcctgaagccactatgggaggaaatggtgttactgtagccctg 484
Query: 125 ggcaagtgagaaccatgcagaggatccatgagagaagatggagttctgcagtgacccagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggcaagtgagaaccatgcagaggatccatgagagaagatggagttctgcagtgacccagg 424
Query: 185 ctcttctagaaagcagacaaatgggaaagacatctttgacttctctttcaaccttcctcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctcttctagaaagcagacaaatgggaaagacatctttgacttctctttcaaccttcctcc 364
Query: 245 tcctcctccactgtttgaatcaaagaaagtgatacagaaaatgaatctgaagactgtgtc 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 363 tcctcctccactgtttgaatcaaagaaagtgagacagaaaatgaatctgaagactgtgtc 304
Query: 305 catggcactcagcttcatgagtatagagctgggtatagggccaaccaagaaagaactacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 catggcactcagcttcatgagtatagagctgggtatagggccaaccaagaaagaactacc 244
Query: 365 cagattagaaaggctattttaaaactcaaattctgccaagagagggaagggagagggaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cagattagaaaggctattttaaaactcaaattctgccaagagagggaagggagagggaga 184
Query: 425 gagataaggaaagaggggagagagggagagagagaaa 461
|||||||||||||||||||||||||||||||||||||
Sbjct: 183 gagataaggaaagaggggagagagggagagagagaaa 147
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_h24.g1 MSMg01no415_h24.g1 CHROMAT_FILE:
MSMg01no415_h24.g1 PHD_FILE: MSMg01no415_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:54 2005
(499 letters)
>mm_chr15_3280933_3281831
Length = 899
Score = 951 bits (492), Expect = 0.0
Identities = 498/500 (99%), Gaps = 1/500 (0%)
Strand = Plus / Plus
Query: 1 atagcagggtgagattgttgatggcttttctaacttgtttattgaaataaaaattggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atagcagggtgagattgttgatggcttttctaacttgtttattgaaataaaaattggcac 259
Query: 61 agtaacaactgaaaagagtatagaggctactcaataatgaaaactaaagttaccatatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agtaacaactgaaaagagtatagaggctactcaataatgaaaactaaagttaccatatga 319
Query: 121 tccagtgatttttttattaataatttatatcccaaggaaataagattaatatgttaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tccagtgatttttttattaataatttatatcccaaggaaataagattaatatgttaaaga 379
Query: 181 tacatttgcctgatcatgataactgtagccaaaatatggatcaacttgggccctttgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tacatttgcctgatcatgataactgtagccaaaatatggatcaacttgggccctttgatg 439
Query: 241 aacaaatgggtagaaaaaaaa-gggatattttggaatatacaagagagcagatttgaaac 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aacaaatgggtagaaaaaaaaagggatattttggaatatacaagagagcagatttgaaac 499
Query: 300 tgtcagttcaaaaatatctgtgaaaaatatatccattcatagctctgctgaaccatctta 359
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtcagttcaaaaacatctgtgaaaaatatatccattcatagctctgctgaaccatctta 559
Query: 360 ccacatataaatatttcaaaacatcattaacatgataattaatgataattttacataata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccacatataaatatttcaaaacatcattaacatgataattaatgataattttacataata 619
Query: 420 tatgattatgtgattagtgtaattactctcaggctatttgaaaaaatatttaatctagtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tatgattatgtgattagtgtaattactctcaggctatttgaaaaaatatttaatctagtt 679
Query: 480 tactgagatgtaagcatcag 499
||||||||||||||||||||
Sbjct: 680 tactgagatgtaagcatcag 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
