Query= MSMg01no415_i09.b1 MSMg01no415_i09.b1 CHROMAT_FILE:
MSMg01no415_i09.b1 PHD_FILE: MSMg01no415_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:56 2005
(211 letters)
>mm_chr15_21161244_21161860
Length = 617
Score = 350 bits (181), Expect = e-101
Identities = 205/217 (94%), Gaps = 8/217 (3%)
Strand = Plus / Minus
Query: 1 gctttttagttgttatttgtttgtttattttgttgttgttgaagtg------tttttttt 54
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 gcttttttgttgttatttgtttgtttattttgttgttgttgaagtggttttttttttttt 322
Query: 55 tttttgctttttttcccaaaattggaaacaatttctgttggtataaaatatagcctaata 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttgctttttttcccaaaattggaaacaatttctgttggtataaaatatagcctaata 262
Query: 115 taaggaaaagccatcaagtcattaacacgtgtatacttgctccatgaccaaaggaatttt 174
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 taaggaaaagccatcaagtcattaacatgtgtatacttgctccatgaccaaaggaatttt 202
Query: 175 gacatacatacatatacatacatacacacacatacac 211
||||||||||||||| |||||||||| ||| |||||
Sbjct: 201 gacatacatacatatgcatacatacataca--tacac 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 617
Length adjustment: 9
Effective length of query: 202
Effective length of database: 608
Effective search space: 122816
Effective search space used: 122816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no415_i09.g1 MSMg01no415_i09.g1 CHROMAT_FILE:
MSMg01no415_i09.g1 PHD_FILE: MSMg01no415_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:56 2005
(442 letters)
>mm_chr15_20960141_20960982
Length = 842
Score = 833 bits (431), Expect = 0.0
Identities = 440/443 (99%), Gaps = 1/443 (0%)
Strand = Plus / Plus
Query: 1 agcatttcacaagcaaggagtgtcggaaactcatttgaacattttctttctgcctcattt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 agcatttcacaagcaaggagtgtcggagactcatttgaacattttctttctgcctcattt 260
Query: 61 atttgatgtatcttcttactcttctggctgacacaaattcagccttttgaccctgtggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttgatgtatcttcttactcttctggctgacacaaattcagccttttgaccctgtggtg 320
Query: 121 gagccaacaaatcttaagagaaggtaaaatgttggcaaaaattgagaaggctcaaatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagccaacaaatcttaagagaaggtaaaatgttggcaaaaattgagaaggctcaaatctg 380
Query: 181 atatgtcataatacatttccatttaccttattaacttatagtattcaattccattaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatgtcataatacatttccatttaccttattaacttatagtattcaattccattaaaag 440
Query: 241 tttgttgtacatcaatgattgccatgatcatttcttttgcctttagttacactatataaa 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgttggacatcaatgattgccatgatcatttcttttgcctttagttacactatataaa 500
Query: 301 gtattccctccttttactaagaactgtggtgacctcatcatttaatattttatatttatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtattccctccttttactaagaactgtggtgacctcatcatttaatattttatatttatt 560
Query: 361 atcagtacataaactctgggcttcctcaaccataagtaaaa-tttccatattttaatagt 419
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 atcagtacataaactctgggcttcctcaaccataagtaaaaatttccatattttaatagt 620
Query: 420 gtggatttcagcttttcacatgg 442
|||||||||||||||||||||||
Sbjct: 621 gtggatttcagcttttcacatgg 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
