Query= MSMg01no415_i19.b1 MSMg01no415_i19.b1 CHROMAT_FILE:
MSMg01no415_i19.b1 PHD_FILE: MSMg01no415_i19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:58 2005
(558 letters)
>mm_chr15_81902799_81903754
Length = 956
Score = 1029 bits (532), Expect = 0.0
Identities = 551/561 (98%), Gaps = 8/561 (1%)
Strand = Plus / Minus
Query: 1 attcttagtgattccgc---gccacatcctagcatcgacatacctctaatgcttaatgca 57
||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 attcttagtga----gcctggccacatcctagcatcgacatacctctaatgcttaatgca 701
Query: 58 gtacttagcaaagaggtgatgcctgagaaaaaacagaatcagttatcaactcattgagtt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gtacttagcaaagaggtgatgcctgagaaaaaacagaatcagttatcaactcattgagtt 641
Query: 118 ccctcctacgttcctaagtgagcaatttcagtagccactcagtagccagggctacaattc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ccctcctacgttcctaagtgagcaatttcagtagccactcagtagccagggctacaattc 581
Query: 178 aggctaatagtccccagtttgaatggtaggtatacacagcttcaggaggaacaccttacc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aggctaatagtccccagtttgaatggtaggtatacacagcttcaggaggaacaccttacc 521
Query: 238 ttcaatacagaggtctgccatactcccatcttcctcatctgtttaacagtccttggagca 297
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 520 ttcaatacagaggtctgccatactcccatcttccaca-ctgtttaacagtccttggagca 462
Query: 298 gagggaggcaagaataggatgattagcagtgcggtctcagtgcatacagttttacaaagg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gagggaggcaagaataggatgattagcagtgcggtctcagtgcatacagttttacaaagg 402
Query: 358 caatgataattctaagcccagccgttttaaacaatgcccttgctcagttctgatctcaac 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 caatgataattctaagcccagccgttttaaacaatgcccttgctcagttctgatctcaac 342
Query: 418 cacacctagagtcctcagtgtccagtctaactcttaaatgatgacagtccgagttcgcgg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cacacctagagtcctcagtgtccagtctaactcttaaatgatgacagtccgagttcgcgg 282
Query: 478 caagcagactgtatgccctggagtctgtgacccatctagggttaacaatacatttggcag 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 caagcagactgtatgccctggagtctgtgacccatctagggttaacaatacatttggcag 222
Query: 538 tcttggntttctcctgaggtc 558
|||||| ||||||||||||||
Sbjct: 221 tcttggttttctcctgaggtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 956
Length adjustment: 10
Effective length of query: 548
Effective length of database: 946
Effective search space: 518408
Effective search space used: 518408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_i19.g1 MSMg01no415_i19.g1 CHROMAT_FILE:
MSMg01no415_i19.g1 PHD_FILE: MSMg01no415_i19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:58 2005
(447 letters)
>mm_chr15_81735723_81736569
Length = 847
Score = 841 bits (435), Expect = 0.0
Identities = 444/447 (99%)
Strand = Plus / Plus
Query: 1 aaggccaacatggtgtacagagtgagttccagggcagccagggctacacagagaaactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccaacatggtgtacagagtgagttccagggcagccagggctacacagagaaactct 260
Query: 61 attgcgggcaaaactttttgattctcagacactatgtggtagagtgtgcttataatccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgcgggcaaaactttttgattctcagacactatgtggtagagtgtgcttataatccca 320
Query: 121 gtacttttccatatcgtgtgtttcttatgtcttctcattctcggctcactgacaacctct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 gtacttttccatatcgtgtgtttcttatgtcttctcattctcggctcactgacagcctct 380
Query: 181 tcaagaggctgagctcctggtgtgcaggggcagcattttgggctgttggatttgtccctc 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaagaggctgagctcctggtgggcaggggcagcattttgggctgttggatttgtccctc 440
Query: 241 tgttgacttatttactgcctggaacctgctatttggtaagtggcaggtatctggctcagg 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttgacttagttactgcctggaacctgctatttggtaagtggcaggtatctggctcagg 500
Query: 301 cgtacaaataaagtcttaaaaccagtttctgcttcattctcttcccttgtggattccaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgtacaaataaagtcttaaaaccagtttctgcttcattctcttcccttgtggattccaga 560
Query: 361 cattgccaacctagcagaagaattcaaggatcacttagtgcctgatcctggctgccagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattgccaacctagcagaagaattcaaggatcacttagtgcctgatcctggctgccagta 620
Query: 421 tgaccaagtgattgaaattaacctcaa 447
|||||||||||||||||||||||||||
Sbjct: 621 tgaccaagtgattgaaattaacctcaa 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
