Query= MSMg01no415_l16.b1 MSMg01no415_l16.b1 CHROMAT_FILE:
MSMg01no415_l16.b1 PHD_FILE: MSMg01no415_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:11 2005
(436 letters)
>mm_chr15_7241711_7242546
Length = 836
Score = 828 bits (428), Expect = 0.0
Identities = 434/436 (99%)
Strand = Plus / Minus
Query: 1 aagacagggaagggaagaactgaaccctgcttcctccagtgggcaggccctgtgactttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aagacagggaagggaagaactgaaccctgcttcctccagtgggcaggccctgtgactttt 577
Query: 61 ctcttcccccagaccagacactgtcagcactcacagctcactcacacttggtatggtaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ctcttcccccagaccagacactgtcagcactcacagctcactcacacttggtatggtaac 517
Query: 121 ccagaggaagtctctgtctccatttcctggacttttagtaagtcctgctcgtgaagaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ccagaggaagtctctgtctccatttcctggacttttagtaagtcctgctcgtgaagaacg 457
Query: 181 aggcaagcacacatgtaagaaatgaagtccatccaggcttctcctcttatttcttttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aggcaagcacacatgtaagaaatgaagtccatccaggcttctcctcttatttcttttcct 397
Query: 241 gatatgctcttctcaaaagacaaacaccaacattttgtttcctgatactctttaaatacc 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gatatgctcttcacaaaagacaaacaccaacattttgtttcctgatactctttaaatacc 337
Query: 301 tgggagtaggggacatttcacaccagatggagggtgcagggagggaaccagcttaaggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 336 tgggagtaggggacatttcacaccagatggagggtgcagggagggaaccagctgaaggtc 277
Query: 361 taatagtcgccttctgcccaccatagctagctttcaatccagtgtcaagtgtttttgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 taatagtcgccttctgcccaccatagctagctttcaatccagtgtcaagtgtttttgttt 217
Query: 421 tgttttaatttaacct 436
||||||||||||||||
Sbjct: 216 tgttttaatttaacct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_l16.g1 MSMg01no415_l16.g1 CHROMAT_FILE:
MSMg01no415_l16.g1 PHD_FILE: MSMg01no415_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:11 2005
(239 letters)
>mm_chr15_7084107_7084745
Length = 639
Score = 424 bits (219), Expect = e-123
Identities = 234/243 (96%), Gaps = 8/243 (3%)
Strand = Plus / Plus
Query: 1 cagttgtcatacattgtcttgagtaatgctgcatgtgttccttctagacacttgcactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagttgtcatacattgtcttgagtaatgctgcatgtgttccttctagacacttgcactgc 260
Query: 61 ccctgctgacgcaggctgaaggtggtgctcacaagccttgcccactcagtgttgggaggt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 ccctgctgacgcaggctgaaggtggtgctcgcaagccttgcccactcagtgttgggaggt 320
Query: 121 gaggaggaatttttggcgtatgtttttggtttctaatgtacttttgcacggtgg----tt 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 gaggaggaatttttggcgtatgtttttggtttctaatgtacttttgcacggtgggaagtt 380
Query: 177 tttttttggctctccttcattcttttggcttctaaggctgaataagttggaattagcatt 236
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttt----ggctctccttcattcttttggcttctaaggctgaataagttggaattagcatt 436
Query: 237 cat 239
|||
Sbjct: 437 cat 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
