Query= MSMg01no415_m14.b1 MSMg01no415_m14.b1 CHROMAT_FILE:
MSMg01no415_m14.b1 PHD_FILE: MSMg01no415_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:15 2005
(419 letters)
>mm_chr15_8909655_8910473
Length = 819
Score = 774 bits (400), Expect = 0.0
Identities = 415/420 (98%), Gaps = 2/420 (0%)
Strand = Plus / Minus
Query: 1 aagaggtaaccacactcacaaatgtacaagaatatatgacataagagagatagacaatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aagaggtaaccacactcacaaatgtacaagaatatatgacataagagagatagacaatcg 560
Query: 61 gaggagaattgggaaggaactcatgtccagcacagcaaaccataaagcccctagcacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gaggagaattgggaaggaactcatgtccagcacagcaaaccataaagcccctagcacaaa 500
Query: 121 aaggggaagaagaaagtgaa-aataatgcaattaagtcaaaccaacaaaacctaggcatc 179
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaggggaagaagaaagtgaacaataatgcaattaagtcaaaccaacaaaacctaggcatc 440
Query: 180 tggctggtttgtgtctgtgtttgtctcagctttgggaatattctccagtttattctacgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tggctggtttgtgtctgtgtttgtctcagctttgggaatattctccagtttattctacgg 380
Query: 240 attatgtctttggcctcaggtgctttgcacaacagacattttttttttccttttgctgag 299
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 379 attatgtctttggcctcaggtgctttgcacaacagacattttttttt-ccttttgctgag 321
Query: 300 gagtatgtgacagtcacaggagtgactctgtttatttttaaaataaacagtgaaaataaa 359
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gagtgtgtgacagtcacaggagtgactctgtttatttttaaaataaacagtgaaaataaa 261
Query: 360 gagtgaaaatcacctgtattgaagccgattagttgtactgctttcatttattttaatgac 419
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 260 gagtgaaaatcacctgtattgaagccgattagttgtactgcttccatttatcttaatgac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_m14.g1 MSMg01no415_m14.g1 CHROMAT_FILE:
MSMg01no415_m14.g1 PHD_FILE: MSMg01no415_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:16 2005
(245 letters)
>mm_chr15_8743103_8743747
Length = 645
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%)
Strand = Plus / Plus
Query: 1 aattctacatcttcatctgaaggctgctagcagaatactgacttctaggatgagggtctt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 aattctacatcttcatctgaaggctgccagcagaatactgacttctaggatgagggtctt 260
Query: 61 aagcccacgtccacagtgacacacctactccagcaaggccacacctcttaatagtgccac 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtccacgtccacagtgacacacctactccagcaaggccacacctcttaatagtgccac 320
Query: 121 tccctgggccaggcccacagtccaagccaagttgtttaaaaatgaagcagccttttatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccctgggccaggcccacagtccaagccaagttgtttaaaaatgaagcagccttttatat 380
Query: 181 cttgttgaatgaatcctctaagtcagacatttatgtgttattcaattgggcaggtctgac 240
| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgttgaatgaattctctaagtcagacatttatgtgttattcaattgggcaggtctgac 440
Query: 241 c 241
|
Sbjct: 441 c 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
