XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTACAA
GCTGAAGTAATAGTATGAAAATTTGGATTAGAACAAAAGCTGGCATACGT
GTTACAAAATAAACCAAACCCATTTTTTTCTAATTCTACTTTATCTTAAA
AATCAATGTCCAGATAAAAATAGTGAGAACATAGTTTGCATTTATTATGA
GTATAGACACAAACTAATATGGCAGTGAGACCATACAGGGTAGGAAAGGA
GGTCATATATGCTCCCACAAGATGTTCATAAATGGTAGCAGATAGCTGGA
ATCTTAACACTTGAGAGGAGAAGCAGAACTGCCGCAATTTGAGGTTGATC
AGAGTTATGTAATGAGCTTCAAACCAACTGGTTTGGGTTTTAAAATGAGA
CCCTGTCTTTAAATAAAAAATGAATTTCACACTATACACACAGTGGTAAG
ATTTTGGAAACTGATAGATAAATGAACAACTTTGGAGCTGAAGAGATGGG
TGATCAGNTAAGGATGCTTAGTACTCTCCTAGAGGACCCAGTTTCAGNTC
CCAGAACCCCAGTGGGGAGCTCAAGCCACTGGTACCTCAGCTCCAAAGAC
TGATGGCCTGTTGTGGCCTCTGATGGACCTACATGTATGCATACGAACCC
CCCCTGCCCCCGCCACTTGTAACCTGGTTGGCCCCCCAATAATGGATAAA
AATTGG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGCAGTGGAGCCATCTGATCCCAG
GTTTTTATTGTGGGAACACTGAATTATCCCTTCAGAATTATTGCTTGTTA
TATGTTTATTTAAATCATTTATATCTTCTGAATTTAATTTTGGCATTCAT
AAATATACCCATTTCTTTTATTTTTCGAGCCTTTCAAAATAGAATTTTTC
CAAGTATTCACTAATGAGTAACTGGATCTCATCGTTATCTCTTATCTTCA
TCTTTAATTTTCCTAAGTTGGGTCTTATATCTCTCTTTCTGTTGGTTTGG
ATAAGGGTTCATCAACTTCATTAACCTTTTCAAAGAGCCAACTCTGATTT
GCATATTGTTCTTTGTTTCTGTTTCATTGCATTTTGCCCTAATCTTGATT
ATTTCTTGTGATCATTTCATTGTACTTCAGTTTGGCCTCTCCATCACCCC
TATATTTATTTTCAGTCTCCCTGCTTTTCTGATGTGAGCATTTACAGCTG
CAAACTCTCCTCTTTAGACAACACTGCATTCTACAACCCCTTGAAATGGT
TGCAAAAATGGTTTATGCTTTGCATTTTTGTTTTGGAAATTATGTCTAAA
AATTTAAAAGAAAGGACCGGTTGGATGCCTAATTTGTAAAAATCCGGCCG
GAAGGTGGGGGTAATTGCATATTGAA

Query= MSMg01no416_e18.b1 MSMg01no416_e18.b1 CHROMAT_FILE:
MSMg01no416_e18.b1 PHD_FILE: MSMg01no416_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:53 2005
         (460 letters)



>mm_chr15_71950218_71951077
          Length = 860

 Score =  851 bits (440), Expect = 0.0
 Identities = 446/448 (99%), Gaps = 1/448 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctacaagctgaagtaatagtatgaaaatttggattagaacaaaagctggcatacg 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaattctacaagcagaagtaatagtatgaaaatttggattagaacaaaagctggcatacg 388

                                                                       
Query: 65  tgttacaaaataaaccaaacccatttttttctaattctactttatcttaaaaatcaatgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgttacaaaataaaccaaacccatttttttctaattctactttatcttaaaaatcaatgt 328

                                                                       
Query: 125 ccagataaaaatagtgagaacatagtttgcatttattatgagtatagacacaaactaata 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccagataaaaatagtgagaacatagtttgcatttattatgagtatagacacaaactaata 268

                                                                       
Query: 185 tggcagtgagaccatacagggtaggaaaggaggtcatatatgctcccacaagatgttcat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tggcagtgagaccatacagggtaggaaaggaggtcatatatgctcccacaagatgttcat 208

                                                                       
Query: 245 aaatggtagcagatagctggaatcttaacacttgagaggagaagcagaactgccgcaatt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aaatggtagcagatagctggaatcttaacacttgagaggagaagcagaactgccgcaatt 148

                                                                       
Query: 305 tgaggttgatcagagttatgtaatgagcttcaaaccaactggtttgggttttaaaatgag 364
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 147 tgaggttgatcagagttatgtaatgagcttcaaaccaactggtttgg-ttttaaaatgag 89

                                                                       
Query: 365 accctgtctttaaataaaaaatgaatttcacactatacacacagtggtaagattttggaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  accctgtctttaaataaaaaatgaatttcacactatacacacagtggtaagattttggaa 29

                                       
Query: 425 actgatagataaatgaacaactttggag 452
           ||||||||||||||||||||||||||||
Sbjct: 28  actgatagataaatgaacaactttggag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space:   382500
Effective search space used:   382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)