Query= MSMg01no418_a10.b1 MSMg01no418_a10.b1 CHROMAT_FILE:
MSMg01no418_a10.b1 PHD_FILE: MSMg01no418_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:06 2005
(204 letters)
>mm_chr15_14140153_14140756
Length = 604
Score = 368 bits (190), Expect = e-106
Identities = 196/198 (98%), Gaps = 1/198 (0%)
Strand = Plus / Plus
Query: 1 caactccagtactcagcacttactacactgactcctaactcactgaaccaaactgaactt 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caactctagtactcagcacttactacactgactcctaactcactgaaccaaactgaactt 260
Query: 61 tcttcactcaactgacttccaaaagccatgccttttgaccatggctgtttccctccacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttcactcaactgacttccaaaagccatgccttttgaccatggctgtttccctccacaa 320
Query: 121 accaactttgccaactgttatttatgtatgtatgtatgtatgtatgtatgtatgtatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accaactttgccaactgttatttatgtatgtatgtatgtatgtatgtatgtatgtatgta 380
Query: 181 tgtatgtatgtatgttat 198
||||||||||||| ||||
Sbjct: 381 tgtatgtatgtat-ttat 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no418_a10.g1 MSMg01no418_a10.g1 CHROMAT_FILE:
MSMg01no418_a10.g1 PHD_FILE: MSMg01no418_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:06 2005
(566 letters)
>mm_chr15_14298964_14299927
Length = 964
Score = 971 bits (502), Expect = 0.0
Identities = 547/562 (97%), Gaps = 3/562 (0%)
Strand = Plus / Minus
Query: 1 tattgattttttttctccaattacattaggcagattgggtccacccactcttctcaatgg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 tattga-tttttttctccaattacattaggcagattgggtccacccactcttctcaatgg 702
Query: 61 atatgaatatgaattgtcagaggtgttttttaacaaggtttcagggaaagggtcccatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 atatgaatatgaattgtcagaggtgttttttaacaaggtttcagggaaagggtcccatat 642
Query: 121 attgcaccaacaggatttgcatgcagttgacagctgcagcccacaaattaaataaaattt 180
|||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 641 attgtaccaacaggatttgcatacagttgacagctgcagccaacaaattaaataaaattt 582
Query: 181 taccgatgtgttaaaaacatgccagttacataaaatacagcaaagtcaatgttttaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 taccgatgtgttaaaaacatgccagttacataaaatacagcaaagtcaatgttttaaaga 522
Query: 241 aaaggaaacgagcaaacgctatccttaaatatgtatagtccatgctggtataatatgcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aaaggaaacgagcaaacgctatccttaaatatgtatagtccatgctggtataatatgcat 462
Query: 301 ttgttgactctcattttagttttgaatttgtgctttcagtaaggaaggaacaaactaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 461 ttgttgactctcattttagttttgaatttgtgctttcagtaaggaaggaacaacctaatt 402
Query: 361 taatgaggccataacggaataaatgttcttaaatcacactttcaaatgggctccctggaa 420
||||| |||||| | | ||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 401 taatggggccattatgaaataaatgttcttaaatcatactttgaaatgggctccctggaa 342
Query: 421 aaggagtttaatcataaggaagaaaccattcagaatacaaaaggacatatatactagtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aaggagtttaatcataaggaagaaaccattcagaatacaaaaggacatatatactagtct 282
Query: 481 taacaattttgctaaatattttaagtgaatggtagactactttcctatttttttctgatt 540
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 281 taacaattttgctaaatatgttaagtgaatggtagactactttcctatttttttctgata 222
Query: 541 gttaaaatatatggt-cccccc 561
|||||| |||||||| ||||||
Sbjct: 221 gttaaa-tatatggttcccccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 964
Length adjustment: 10
Effective length of query: 556
Effective length of database: 954
Effective search space: 530424
Effective search space used: 530424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
