AACTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTTAGCCCCCAC
TCTCTTCATCCTCTAAAGACAAGCCTGCACCGTGCCAACTTGATATAATG
ATCAACATACCTGATCCGAGCGAGAACTGGAAATCCTCTCACGAATGATG
AAGGGTGTCTGTGACAACCATAGTATCGCCAGGCCTGAAATGACCAAATT
CTCCATATATGTCACACCTAGATGACATTGTCTGGCTTTGCGATTTCCAT
GCACCATTCCTGTCGATGCACCTGTATTAATATTTACCCCCCCCCCAGCC
CCGAAAAAACATATGTAAATATCATTCCTGCTGCATAGACAGACACTAAA
TTCTTTTCCTGAATATTATCTACCTGATCTCTATCTATAAAGTCTTAAAA
TGGATCAACTGGTGAATAGCTAAACCCACATAAGGATGTGACTCCATCAT
CAGGACTCTTACGGCAGGACCTGCCTGTTATCCTAGTACTGGCGAGGTGG
AGATGGTGATCTTGAATCCCCGCTCGCCTGACTATTGGCACCAGCGCTGT
CCGCTGACTGTATGCTCTTAACAATTCGACTTTACCATCACTCGACCTTT
ACTCTTGCCGCTACTCCCTCCTCGGACNCCTTCTTAATCTGTGCGACGTA
TACTTTTTATCCGCCCCTTTTGTCAGTTCCCTATTTCCCCTCCCGTACCT
ATCTATG

GTTCAGTATGGAGTAGGAGAGGCGNGNGNGNGGCTGCCGAAGCCCCGATG
AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATTTAGCAAACATAAACATACCGTTATTGATTA
TCACTACAGGTAAATTTAAAGTCTGGGATGTAGAAACGTGGGCAGATGCC
ACTGATACATGTAAACCTGAACTGTCATATATTGATAACTACAAGGATGA
GCAATGAAAACACAGGAGTCAATCATTCTATGTATTAACTTTCAAATATG
CCTTACGAGTTTTCATTAGTAAAAAGGTTTAAAAACAATAAGCTATCTGT
AGCTTTAAGAATATGCTGTTTGAAAAGATACTAAAAGAATTAGCAGGAAA
AAGGTGACAGAAAGGTGGTAGAAATTCAATGGTGATGAGCTGTCAAACTA
TTCCCATTGCCTGTCTGCAGCCAGCGTATTTGTATCATAGTTCCTGGTCA
GTTAGATTCTGCTCTGTGAACTGAGTTCTCTCTTTAAAATCTGACATTTC
TTAGCACAGGAACATATACTGACACTACTTTCTATATGTTTTTCGCCATG
TGCATATTTAACTCACAAATACTTGTGCATCAAAATGCTAGCTGAAATAA
AACTGGGCAGTTTCAACTGCCACCACTGTAAGTTTCTCTGTAGTCCACAT
TTTGCTTTCTTTGTATCTGGGCTCTTTCATTTGTAACCTTCAACCTTGCT
TTGTGCCCCTTTCTTCCTTTGCTTCCCAGTATGGT

Query= MSMg01no418_k02.g1 MSMg01no418_k02.g1 CHROMAT_FILE:
MSMg01no418_k02.g1 PHD_FILE: MSMg01no418_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:53 2005
         (555 letters)



>mm_chr15_40362947_40363902
          Length = 956

 Score = 1006 bits (520), Expect = 0.0
 Identities = 547/556 (98%), Gaps = 1/556 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttagcaaacataaacataccgttattgattatcactacaggtaaatttaaagtctggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttagcaaacataaacataccgttattgattatcactacaggtaaatttaaagtctggg 260

                                                                       
Query: 61  atgtagaaacgtgggcagatgccactgatacatgtaaacctgaactgtcatatattgata 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 atgtagaaacgtgggcagatgccactgatacacgtaaacctgaactgtcatatattgata 320

                                                                       
Query: 121 actacaaggatgagcaatgaaaacacaggagtcaatcattctatgtattaactttcaaat 180
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actataaggatgagcaatgaaaacacaggagtcaatcattctatgtattaactttcaaat 380

                                                                       
Query: 181 atgccttacgagttttcattagtaaaaaggtttaaaaac-aataagctatctgtagcttt 239
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 atgccttacgagttttcattagtaaaaaggtttaaaaacaaataagctatctgtagcttt 440

                                                                       
Query: 240 aagaatatgctgtttgaaaagatactaaaagaattagcaggaaaaaggtgacagaaaggt 299
           ||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 441 aagaagacgctgtttgaaaagatactaaaagaattagcaggaaaagggtgacagaaagct 500

                                                                       
Query: 300 ggtagaaattcaatggtgatgagctgtcaaactattcccattgcctgtctgcagccagcg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 ggtagaaattcaatggtgatgagctgtcaaactattcccattgcctgtctgtagccagcg 560

                                                                       
Query: 360 tatttgtatcatagttcctggtcagttagattctgctctgtgaactgagttctctcttta 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttgtatcatagttcctggtcagttagattctgctctgtgaactgagttctctcttta 620

                                                                       
Query: 420 aaatctgacatttcttagcacaggaacatatactgacactactttctatatgtttttcgc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatctgacatttcttagcacaggaacatatactgacactactttctatatgtttttcgc 680

                                                                       
Query: 480 catgtgcatatttaactcacaaatacttgtgcatcaaaatgctagctgaaataaaactgg 539
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 681 catgtgcatatttaactcacaaatacttgtgcatcaaaatgcaagctgaaataaaactgg 740

                           
Query: 540 gcagtttcaactgcca 555
           ||||||||||||||||
Sbjct: 741 gcagtttcaactgcca 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 956
Length adjustment: 10
Effective length of query: 545
Effective length of database: 946
Effective search space:   515570
Effective search space used:   515570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)