Query= MSMg01no419_c15.b1 MSMg01no419_c15.b1 CHROMAT_FILE:
MSMg01no419_c15.b1 PHD_FILE: MSMg01no419_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:35 2005
(214 letters)
>mm_chr15_31755439_31756049
Length = 611
Score = 391 bits (202), Expect = e-113
Identities = 210/214 (98%), Gaps = 3/214 (1%)
Strand = Plus / Minus
Query: 1 gatcagtaattataatcaaaggaacaattacctttgttgagcaagattctgcttttaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gatcagtaattataatcaaaggaacaattacctttgttgagcaagattctgcttttaatt 352
Query: 61 aacctgtttctatgtttgttcctcaatgaaaaggcctccgtgaagaatgcttctaatgag 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 351 aacctgtttctatgtttgttcctcaatgaaaaggcctccgtgaagaatg---ctaatgag 295
Query: 121 tccttgttctctggatccttgaagaacagatgggcaataaggaaatggcctaaaggccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tccttgttctctggatccttgaagaacagatgggcaataaggaaatggcctaaaggccct 235
Query: 181 cacattctgctttcccaagactccattgtatctc 214
|| |||||||||||||||||||||||||||||||
Sbjct: 234 catattctgctttcccaagactccattgtatctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 611
Length adjustment: 9
Effective length of query: 205
Effective length of database: 602
Effective search space: 123410
Effective search space used: 123410
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_c15.g1 MSMg01no419_c15.g1 CHROMAT_FILE:
MSMg01no419_c15.g1 PHD_FILE: MSMg01no419_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:35 2005
(244 letters)
>mm_chr15_31607545_31608188
Length = 644
Score = 433 bits (224), Expect = e-126
Identities = 239/244 (97%)
Strand = Plus / Plus
Query: 1 agatcgcctaggagggatttctctgcattataaggattcccgtggacaggggcccaagga 60
||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 201 agatctcctaggagggatttccctgcattataaggattcccgtggagaggggcccaagga 260
Query: 61 aagtggactcatgaaaggggagtcaaggctacacaaagatggaaatagagaggagtcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtggactcatgaaaggggagtcaaggctacacaaagatggaaatagagaggagtcaat 320
Query: 121 gtagccataagccaaacagtgccaaggaaggtgggcagccaactagaaccagagagttca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 gtagccataagccaaacagtgccaaggaaggtgggcagccaactagaaccagagaggtca 380
Query: 181 taggacaaattctctcccactctctcatgggcattcccaacccgtgaagaatacatataa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggacaaattctctcccactctctcatgggcattcccaacccgtgaagaatacatataa 440
Query: 241 atgt 244
||||
Sbjct: 441 atgt 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
