Query= MSMg01no419_e09.b1 MSMg01no419_e09.b1 CHROMAT_FILE:
MSMg01no419_e09.b1 PHD_FILE: MSMg01no419_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:44 2005
(248 letters)
>mm_chr15_89898504_89899151
Length = 648
Score = 433 bits (224), Expect = e-126
Identities = 242/248 (97%)
Strand = Plus / Minus
Query: 1 catctcaggatgcgagttttcttgatctgttttgggaaaaaaaatagacctgtgaaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 catctcaggatgcgagttttcttgatctgttttgggaaaaaaaatagacctgtgaaatgt 389
Query: 61 gactctaataaaatcttgttattgtatttttctactcttaatgattattatcaaaataga 120
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 388 gactctaataaaatcttgttattgtatttctctactcttaatgattaatatcaaaataga 329
Query: 121 accatcatccagtgttgcgatttaagaaaagattatgcccagtgccatattgacttaagc 180
|||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 328 accatcatccagtgttacgatttgagaaaagattatgcccagtgccatgttgacttaagc 269
Query: 181 aacagttgagaatctgtggaagtatgtgagtatgtgcgatcaggcatgcacttgccaggc 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aacagttgagaatctgtgggagtatgtgagtatgtgcgatcaggcatgcacttgccaggc 209
Query: 241 tctcatat 248
||||||||
Sbjct: 208 tctcatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_e09.g1 MSMg01no419_e09.g1 CHROMAT_FILE:
MSMg01no419_e09.g1 PHD_FILE: MSMg01no419_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:44 2005
(476 letters)
>mm_chr15_89701664_89702539
Length = 876
Score = 837 bits (433), Expect = 0.0
Identities = 466/477 (97%), Gaps = 1/477 (0%)
Strand = Plus / Plus
Query: 1 tttgtaccccattctttgtaaatttttagttctgtaccccatttttaatagggtcgtttg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtaccccattctttgtaaatttgtagttctgtaccccatttttaatagggtcgtttg 260
Query: 61 gttgtctggagtctaacttcttgagatctttgtatataatggatattagccctctatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgtctggagtctaacttcttgagatctttgtatataatggatattagccctctatcag 320
Query: 121 atttagggttggtaatgatcttttcccaatctgttggttgccattttggcctattgactg 180
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 atttagggttggtaacgatcttttcccaatctgttggttgccattttggcctattgacag 380
Query: 181 tgtcatttgccttacataagctttgcaattttatgaggttccatttgtcaattcttgatc 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcctttgccttacataagctttgcaattttatgaggttccatttgtcaattcttgatc 440
Query: 241 ttatattttattctattggtattctgtttagaaaatgactttaaactcttgatatgcctg 300
||| | || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttagagcataagctattggtattctgtttagaaaatgactttaaactcttgatatgcctg 500
Query: 301 cagttatttctaaagaactctgattatgaaactcagctcttaggtttcttgttttggttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagttatttctaaagaactctgattatgaaactcagctcttaggtttcttgttttggttt 560
Query: 361 gttttctcagatttattttttatcaattctttcattgccataattttattttattatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttttctcagatttattttttatcaattctttcattgccataattttattttattatttt 620
Query: 421 tatagtctacatttccttgctgacattttttttt-cattttttgaattttcttgtca 476
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 tatagtctacatttccttgctgacattttttttttcattttttgaattttcttgtca 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
