Query= MSMg01no420_j02.b1 MSMg01no420_j02.b1 CHROMAT_FILE:
MSMg01no420_j02.b1 PHD_FILE: MSMg01no420_j02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:27 2005
(144 letters)
>mm_chr15_66759238_66759781
Length = 544
Score = 259 bits (134), Expect = 5e-74
Identities = 140/142 (98%)
Strand = Plus / Minus
Query: 3 cataagtaagacagagcaacaggacagattatcctctagcccaagagcacaaaaatatat 62
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 344 cataagtaagacagagcaaaaggacagattatcctctagcccaagagcacaaaaatgtat 285
Query: 63 tcgcacaagaaggggcacttgacttctgtggccgtcctccagctaaggaaaaccttatac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tcgcacaagaaggggcacttgacttctgtggccgtcctccagctaaggaaaaccttatac 225
Query: 123 agatctcacgtgagtcttggca 144
||||||||||||||||||||||
Sbjct: 224 agatctcacgtgagtcttggca 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no420_j02.g1 MSMg01no420_j02.g1 CHROMAT_FILE:
MSMg01no420_j02.g1 PHD_FILE: MSMg01no420_j02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:27 2005
(338 letters)
>mm_chr15_66562645_66563381
Length = 737
Score = 605 bits (313), Expect = e-177
Identities = 331/337 (98%), Gaps = 1/337 (0%)
Strand = Plus / Plus
Query: 1 cagggagccgaagtagcttcttttggtggtaaacagaatcaaacagcttatttatgggat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggagctgaagtagcttcttttggtggtaaacagaatcaaacagcttatttatgggat 260
Query: 61 ggctgcctcacagatggtcttcattactctgagaggcacgcagggtgaaaacaggcattt 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ggctgcctcacagatggtcttcattattctgagaggcacgcagggtgaaaacaggcattt 320
Query: 121 caggaaagacgtgataagttggcagcagtaagtcactgaactgcttatgcctgagcgtgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 caggaaagacgtgataagttggcagcagtaagtcactgaactgcttatgc-tgagcgtgt 379
Query: 181 gcttgctgtgtgtgttcaaggaatgtgccctggcttggcctccctgcaacggagtcacga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 380 gcttgctgtgtgtgttcaaggaatgtgccctggcttggcctccctgcaacggagtcacaa 439
Query: 241 cgaaaggtctttgaaggatttaggcctttcatctgctcatctggctcatctgttcctgtg 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 440 cgaaaggcctttgaaggatttaggcctttcatctgctcatctggctcatctgttcctctg 499
Query: 301 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 105
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 737
Length adjustment: 9
Effective length of query: 329
Effective length of database: 728
Effective search space: 239512
Effective search space used: 239512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
