Query= MSMg01no421_d18.b1 MSMg01no421_d18.b1 CHROMAT_FILE:
MSMg01no421_d18.b1 PHD_FILE: MSMg01no421_d18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:20 2005
(501 letters)
>mm_chr15_35956992_35957892
Length = 901
Score = 953 bits (493), Expect = 0.0
Identities = 500/503 (99%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 1 taacaaggctcaagctcttaatcccaacacttgagaggcagaggcaggaggagctctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 taacaaggctcaagctcttaatcccaacacttgagaggcagaggcaggaggagctctgtg 524
Query: 61 aatctgaggatagcttggtctacagagtgagttccaggacagccatatagtaagtcccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aatctgaggatagcttggtctacagagtgagttccaggacagccatatagtaagtcccta 464
Query: 121 tctcacaaacaaacaaacaaaccaaaaataagaaattgggaaaggtatcagttataattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tctcacaaacaaacaaacaaaccaaaaataagaaattgggaaaggtatcagttataattc 404
Query: 181 taagttcagtcccatcactcagaattaatattctctaactttgcaagtttctttttactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 taagttcagtcccatcactcagaattaatattctctaactttgcaagtttctttttactt 344
Query: 241 ctcaagttatattatataattataaatcaagttcaccaaataattgtattataattctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ctcaagttatattatataattataaatcaagttcaccaaataattgtattataattctac 284
Query: 301 tggtaatggtgaacagtgactatttggtaacataccaaacttatgcaatacaaatagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tggtaatggtgaacagtgactatttggtaacataccaaacttatgcaatacaaatagact 224
Query: 361 ttttctgagctggtgctaaattgagtaggctatttacagtataatgttaatattaagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttttctgagctggtgctaaattgagtaggctatttacagtataatgttaatattaagctt 164
Query: 421 tttttgcctaacatatggtaaaccctacataaaagtctgcatgactggagccaagac--t 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 163 tttttgcctaacatatggtaaaccctacataaaagtctgcatgactggagccaagacttt 104
Query: 479 tcttcctttaatattctaagaca 501
|||||||||||||| ||||||||
Sbjct: 103 tcttcctttaatatcctaagaca 81
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_d18.g1 MSMg01no421_d18.g1 CHROMAT_FILE:
MSMg01no421_d18.g1 PHD_FILE: MSMg01no421_d18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:20 2005
(465 letters)
>mm_chr15_35793933_35794797
Length = 865
Score = 837 bits (433), Expect = 0.0
Identities = 457/465 (98%)
Strand = Plus / Plus
Query: 1 ttctgtagagctggcaaatcaataagtatctgaacctgagattttcatacaaggaatacc 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 ttctgtagagctggcaaatcaataagtatctgaacctgagaatttcatacaaggaatacc 260
Query: 61 ctctagctaaaatttccatcccaaccaacaccttgtgagatgtcagatttctccctttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctagctaaaatttccatcccaaccaacaccttgtgagatgtcagatttctccctttta 320
Query: 121 taagttggtttatactaattgcacaacatttgtaacctttgttgaattcagacaatccta 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggttggtttatactaattgcacaacatttgtaacctttgttgaattcagacaatccta 380
Query: 181 agggaaaacttacaagtactgcacactgaaaaatgaagtactcaacagcccatgaagtat 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 agggaaaacttacaagtactgcacactgaaaaatgaagtactcagcagcccatgaagtat 440
Query: 241 tgcagttgtcaccctcagtggcccatgtaccatggaggtggtcactcttagttgctttag 300
||||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 441 tgcagttgtcacccttagcagcccatgcaccatggcggtggtcactcttagttgctttag 500
Query: 301 aaagaccttcataagttagccctcttcctcttttcttgttcctacacaaaagagtccaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagaccttcataagttagccctcttcctcttttcttgttcctacacaaaagagtccaag 560
Query: 361 ttctgcactaaaaaaacaattcaattttattcctacctaatcgttcttttttatgagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgcactaaaaaaacaattcaattttattcctacctaatcgttcttttttatgagaaa 620
Query: 421 ttgtattctgcaaatgtgaaaggctctatagggtccaaaaaatgt 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtattctgcaaatgtgaaaggctctatagggtccaaaaaatgt 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
