Query= MSMg01no422_h23.b1 MSMg01no422_h23.b1 CHROMAT_FILE:
MSMg01no422_h23.b1 PHD_FILE: MSMg01no422_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:57 2005
(114 letters)
>mm_chr15_4211867_4212380
Length = 514
Score = 186 bits (96), Expect = 4e-52
Identities = 105/108 (97%)
Strand = Plus / Minus
Query: 7 gaattcattaacaccacttggtgatctaggactgagtgaatcatctatctaaagagcgtt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 314 gaattcattaacaccacttggtgatctaggactgagtgaatcatctatctaaagagcatt 255
Query: 67 tgcagaactcaaacctccagttcatagccttggatccaatctttcaga 114
||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 254 tgcagaattcaaacctccagttcatagccttggagccaatctttcaga 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 114
Length of database: 514
Length adjustment: 8
Effective length of query: 106
Effective length of database: 506
Effective search space: 53636
Effective search space used: 53636
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no422_h23.g1 MSMg01no422_h23.g1 CHROMAT_FILE:
MSMg01no422_h23.g1 PHD_FILE: MSMg01no422_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:57 2005
(399 letters)
>mm_chr15_4178288_4179089
Length = 802
Score = 746 bits (386), Expect = 0.0
Identities = 397/402 (98%), Gaps = 3/402 (0%)
Strand = Plus / Plus
Query: 1 tagatgtggctcaggaactaactggtgtgtccattttaagcatgtgttctttaagtaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagatgtggctcaggaactaactggtgtgtccattttaagcatgtgttctttaagtaact 260
Query: 61 tttcattgtgtgacagttttctcatctcagccaatttgctttctaagtgaaaatgggaaa 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcactgtgtgacagttttctcatctcagccaatttgctttctaagtgaaaatgggaaa 320
Query: 121 attggtaaaaatctatatggcccttgctatctatgtaatgtcaatgttttctgaacatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attggtaaaaatctatatggcccttgctatctatgtaatgtcaatgttttctgaacatta 380
Query: 181 aacccagacacatattctaatctggatgagagcgctcaagggaacaaaaccttctctgaa 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacccagacacatatactaatctggatgagagcgctcaagggaacaaaaccttctctgaa 440
Query: 241 aatgtaaatggtcataaatatgagaacacccaatcaacatcaggctatgttcttgtaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgtaaatggtcataaatatgagaacacccaatcaacatcaggctatgttcttgtaagc 500
Query: 301 agcttctaactatagtacttttgacttctattaagacaaaaaaaa---tagttccataaa 357
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 agcttctaactatagtacttttgacttctattaagacaaaaaaaaaaatagttccataaa 560
Query: 358 agtaatatcatttcaattttaaatctcaaccaattcatccaa 399
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtaatatcatttcaattttaaatctcaaccaattcatccaa 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 802
Length adjustment: 9
Effective length of query: 390
Effective length of database: 793
Effective search space: 309270
Effective search space used: 309270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
