Query= MSMg01no422_k13.b1 MSMg01no422_k13.b1 CHROMAT_FILE:
MSMg01no422_k13.b1 PHD_FILE: MSMg01no422_k13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:09 2005
(619 letters)
>mm_chr15_14791266_14792283
Length = 1018
Score = 1120 bits (579), Expect = 0.0
Identities = 606/615 (98%), Gaps = 1/615 (0%)
Strand = Plus / Plus
Query: 5 gaattctctcaggttgtcttcacaaccaacaaattgatagctatccacaataagatattc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctcaggttgtgttcacaaccaacaaattgatagctatccacaataagatattc 264
Query: 65 aatttatcacagcagaccactgtttttaaggatgaataatttatttacatcaaaagtgac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatttatcacagcagaccactgtttttaaggatgaataatttatttacatcaaaagtgac 324
Query: 125 atatagagaaaaatagaaaggagtatctaagacaataaatctgtttttaattctgtaata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atatagagaaaaatagaaaggagtatctaagacaataaatctgtttttaattctgtaata 384
Query: 185 gatttgtacatttcattttttaatatataaggcatttaaaaccacatgacaaaggtttga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatttgtacatttcattttttaatatataaggcatttaaaaccacatgacaaaggtttga 444
Query: 245 gatttccatttatggtaatgttttaaaacaataacatttaatttgaaaaaaaaaaaaact 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 445 gatttccatttatggtaatgttttaaaacaataacatctaatttgaaaaaaaaaaaa-ct 503
Query: 305 agttcaaaaatttccagatgaacatttagatcagggttcattatgttatgtattgcctga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agttcaaaaatttccagatgaacatttagatcagggttcattatgttatgtattgcctga 563
Query: 365 tgttatcttcatcaaccaattaattttttctattttccactcgttgaagcaacagtgata 424
| ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 564 ttttatcgtcatcaaccaattaattttttctattttccactcgttgaaacaacactgata 623
Query: 425 ttaaaataaaggacacttttactcacagatttatgcctgtcttctgggatgagatttttc 484
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttaaagtaaaggacagttttactcacagatttatgcctgtcttctgggatgagatttttc 683
Query: 485 atactttatgaaaaaagaaagcagataaaagttatttaataaattactgtgcatagcttc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atactttatgaaaaaagaaagcagataaaagttatttaataaattactgtgcatagcttc 743
Query: 545 tgtctacattaacttcagcacagaattgaaatttagaggaaaagactcttcctgaaagat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgtctacattaacttcagcacagaattgaaatttagaggaaaagactcttcctgaaagat 803
Query: 605 tgtttcacatgttgt 619
|||||||||||||||
Sbjct: 804 tgtttcacatgttgt 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1018
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1008
Effective search space: 613872
Effective search space used: 613872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_k13.g1 MSMg01no422_k13.g1 CHROMAT_FILE:
MSMg01no422_k13.g1 PHD_FILE: MSMg01no422_k13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:09 2005
(181 letters)
>mm_chr15_14849604_14850184
Length = 581
Score = 304 bits (157), Expect = 3e-87
Identities = 172/177 (97%)
Strand = Plus / Minus
Query: 5 taatcatactgaagaaaagatatctttaaaaaaacaatagctattagaggtttcttgttt 64
|||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 306 taatcatactgaaggaaagctatctttaaaaaaacaatagctatcagaggtttcttgttt 247
Query: 65 tataaatttcaggatggttaatttttggaggtgagagtaattaatgccaaggccaggaag 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tataaatttcaggattgttaatttttggaggtgagagtaattaatgccaaggccaggaag 187
Query: 125 caggagcttgtgggttggtaagcaggaggaaggggaagggaggaagaggtaggggga 181
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 186 caggagcttgtgggttggtaagcaggaggaagggggagggaggaagaggtaggggga 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
