Query= MSMg01no422_k17.b1 MSMg01no422_k17.b1 CHROMAT_FILE:
MSMg01no422_k17.b1 PHD_FILE: MSMg01no422_k17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:10 2005
(630 letters)
>mm_chr15_20147160_20148189
Length = 1030
Score = 1108 bits (573), Expect = 0.0
Identities = 612/628 (97%), Gaps = 7/628 (1%)
Strand = Plus / Minus
Query: 5 gaattcatggatattcctggtgacagaatgttagaggccagcctggaatacatactgaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gaattcatggatattcctggtgacagaatgttagaggccagcctggaatacatactgaat 627
Query: 65 ggttaaacaaaaacagtgtgtaaagttttatttgcttttggttttcattaattccacaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 626 ggttaaacaaaaacagtgtgtaaagttttatttgcttttggttttcattaattccacgaa 567
Query: 125 gtgtaacatattcactgttctgtacttatcagtcatgattcattcacacagcaggtacca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gtgtaacatattcactgttctgtacttatcagtcatgattcattcacacagcaggtacca 507
Query: 185 ttgcagtttagaaagaggattttagagaagttatgtttgaagcttaggagaagtaggcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttgcagtttagaaagaggattttagagaagttatgtttgaagcttaggagaagtaggcag 447
Query: 245 aaatgttttgtattttcttaattcataaatataaaatctttatttttctttaaacgtcat 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 446 aaatgttttgtattttcttaattcataaatataaaagctttatttttctttaaacgtcat 387
Query: 305 tatggttaggaatcttacaagggtatattttgctttgatatattcaattttatggcttaa 364
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 386 tatggttaggaatcttacaagggtatattttgctttgatatgttcaattttatggcttaa 327
Query: 365 aatctggaacacaccaagtaaaaatacataaaaagtaaatccttgacatttttcttgatg 424
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 326 aatctggaacacacaaagtaaaaatacatgaaaagtaaatccttgacatttttcttgatg 267
Query: 425 gattttattggagaaaataattatcagcatgttacatttctctaattatagagactctga 484
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 266 gattttattggagaaaatgattatcagcatgttaaatttctctaattatagagactctga 207
Query: 485 acattaatat--tatatatatattacatattgaaatttaatttaatttaatcatctataa 542
|||||||||| ||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 206 acattaatattatatatatatattacatatt--aa---aatttaatttaatcatctataa 152
Query: 543 ttgttaagttacaatcatagttatggatcaagtaataaaaattaactgtcagttctcana 602
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 151 ttgttaagttacaatcatagttatagatcaagtaataaaaattaactgtcagttctcaaa 92
Query: 603 gtaggtgttacctttagattttcactgt 630
||||||||||||||||||||||||||||
Sbjct: 91 gtaggtgttacctttagattttcactgt 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_k17.g1 MSMg01no422_k17.g1 CHROMAT_FILE:
MSMg01no422_k17.g1 PHD_FILE: MSMg01no422_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:10 2005
(558 letters)
>mm_chr15_19997179_19998137
Length = 959
Score = 700 bits (362), Expect = 0.0
Identities = 432/458 (94%), Gaps = 7/458 (1%)
Strand = Plus / Plus
Query: 102 gaaactgaagattcctgacaatgggttacacatcgtcattgatcagaggtgacaatcatt 161
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 302 gaaactgaagattcctgacaatgggttacacatcatcattgatcagaggtgacaatcata 361
Query: 162 cacatgtttttcctcctttttgccaattaaattaccaaaaagaaaaacaaatattttctc 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cacatgtttttcctcctttttgccaattaaattaccaaaaagaaaaacaaatattttctc 421
Query: 222 aaaggccttttatgtcatgaccatggatatttataaatgcaaataataaaaatataagca 281
||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 422 aaaggtcttttatgtcatgaccatggataaaaataaatgcaaataataaaactataagca 481
Query: 282 tatatatatttgtctacacaggtactatgatgtcaacaagaagttaaaatatatatgatt 341
||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 catacatatttgtctacataggtactatgatgtcaacaagaagttaaaatatatatgatt 541
Query: 342 ttatttcagagcttaaagtatttaaaaatttgagaattcgaatataaattcaatatcaat 401
||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 542 ttatttcagagcttaaaatattaaaaaatttgagaattcgaatataaattcaagatcaat 601
Query: 402 caatgacacatgatgttaaacataaaaaaaa-gcttatttcttgaaatagtctttcctac 460
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 602 caatgacacatggtgttaaacataaaaaaaaagcttatttcttgaaatagtctttcctac 661
Query: 461 taggtaaagattagtcatactttcctatgttaatcttactaacaaatcttacccgctgac 520
||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 662 tagctaaaggttattcatacttttctatgttaatcttactaacaaatcttacccgctgac 721
Query: 521 tgcactcttcctgtccctgttatcatttgctttatgat 558
||||||| || ||||| |||||||||||||||||
Sbjct: 722 tgcactc---ct---cctgtaatcatttgctttatgat 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 959
Length adjustment: 10
Effective length of query: 548
Effective length of database: 949
Effective search space: 520052
Effective search space used: 520052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
