Query= MSMg01no422_l24.b1 MSMg01no422_l24.b1 CHROMAT_FILE:
MSMg01no422_l24.b1 PHD_FILE: MSMg01no422_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:16 2005
(502 letters)
>mm_chr15_3369956_3370857
Length = 902
Score = 758 bits (392), Expect = 0.0
Identities = 407/412 (98%)
Strand = Plus / Minus
Query: 91 gagccatcacagtggagcatggtgctccccagaatcagaaagaggcatgggactgaggac 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 gagccatcacagtggagcatggtgctccccagaatcagaaagaggcatgggactgaggac 843
Query: 151 atgtgacaatggttcctagtggccaaactcaactgacagtggaggagcctagaactctgg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 atgtgacaatggttcctagtggccaaactcaactgacagtggaggagcctagaactctgg 783
Query: 211 gtgatgctgtctccaaggccagtctcttgcatcacagaatcaggggagagaaagatggaa 270
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gtgatgctgtctacaaggccagtctcttgcatcacagaatcaggggagagaaagatggaa 723
Query: 271 aatagatctgggacagcaaatggggagaaactagaaccctgctatatgaattattactat 330
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 722 aatagatctgggacagcaaatggggagaaactataacactgctatatgaattattactat 663
Query: 331 ttattattattatttcatacagtgaatatatattctattcaatccagtttcttcccatta 390
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 662 ttattattattattttatacagtgaatacatattctattcaatccagtttcttcccatta 603
Query: 391 ttttttgttgcagcaatctgtcttacttaactcaacttctgtgagctcatagaagaaagg 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttttttgttgcagcaatctgtcttacttaactcaacttctgtgagctcatagaagaaagg 543
Query: 451 gcggggagctacattagtgaatctgctgaataacttgtccattggtttagca 502
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcggggagctacattagtgaatctgctgaataacttgtccattggtttagca 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_l24.g1 MSMg01no422_l24.g1 CHROMAT_FILE:
MSMg01no422_l24.g1 PHD_FILE: MSMg01no422_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:16 2005
(455 letters)
>mm_chr15_3221279_3222133
Length = 855
Score = 837 bits (433), Expect = 0.0
Identities = 453/467 (97%), Gaps = 12/467 (2%)
Strand = Plus / Plus
Query: 1 gaagcaatttcagaactgggagggagcagactgagcaggctccatccccagggcagggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaagcaatttcagaactgggagggagcagactgagcaggctccatccccagggcagggct 248
Query: 61 ccatccttgctttaaggcagtccaggtggtgtccttcggtgggggagcttttgaatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ccatccttgctttaaggcagtccaggtggtgtccttcggtgggggagcttttgaatttaa 308
Query: 121 gtagagggtggaagcctgaaggtggatgaggggcttttttttttttt------------g 168
||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 309 gtagagggtggaagcctgaaggtggatgaggggctttttttttttttttttttttttttg 368
Query: 169 acagggtttctctgtgtagccctggctgtcctggaactcactctgtagaccaggctggcc 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 acagggtttctctgtgtagccctggctgtcctggaactcactctgtagaccaggctggcc 428
Query: 229 tcgaactcagaaatcctcctgtctctgcctcccaagtgctgggattataggcatgtgcca 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tcgaactcagaaatcctcctgtctctgcctcccaagtgctgggattataggcatgtgcca 488
Query: 289 ccacagcccagcggatgaggggctttaaaatgctggtctgtttttgttgtggtctttgtt 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ccacagcccagcggatgaggggctttaaaatgctggtctgtttttgttgtggtctttgtt 548
Query: 349 gttcagggggagaggatgtgtggcaaagagtatgcttgctttccttttaatggagtacaa 408
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gttcaaggggagaggatgtgtggcaaagagtatgcttgctttccttttaatggagtacaa 608
Query: 409 tcaattgtaggtttgagcatgaacaggtatctaggcttgcaactgaa 455
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 609 tcaattgtagttttgagcatgaacaggtatctaggcttgcaactgaa 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
