Query= MSMg01no423_k18.b1 MSMg01no423_k18.b1 CHROMAT_FILE:
MSMg01no423_k18.b1 PHD_FILE: MSMg01no423_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:24 2005
(523 letters)
>mm_chr15_48665348_48666273
Length = 926
Score = 584 bits (302), Expect = e-171
Identities = 313/318 (98%), Gaps = 3/318 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcagtgtccttgagaggctattacaccaccagtgtgacatccataaaaaaaca 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ggaattctcagtgcccttgagaggctattacaccaccagtgtgacatccataaaaaaaca 259
Query: 64 aaacc---aaaaaaaagcaacaaaaaaccccaccgactacaaaaataattttgtaattta 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aaaccaaaaaaaaaaagcaacaaaaaaccccaccgactacaaaaataattttgtaattta 199
Query: 121 tacattaaaaaaaaaagtagaagaacccagatgtccctcaacagaggaatggatacagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tacattaaaaaaaaaagtagaagaacccagatgtccctcaacagaggaatggatacagaa 139
Query: 181 aatgtgatacatttacataatggcgtactgctcagctattaaaaagaatgaatttatgaa 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 aatgtgatacatttacacaatggcgtactgctcagctattaaaaagaatgaatttatgaa 79
Query: 241 attcctaggcaaatggatggacctggagggcatcatcctgagtgaggtaacccaatcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 attcctaggcaaatggatggacctggagggcatcatcctgagtgaggtaacccaatcaca 19
Query: 301 agagaactcacatgatat 318
||||||||||||||||||
Sbjct: 18 agagaactcacatgatat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 926
Length adjustment: 10
Effective length of query: 513
Effective length of database: 916
Effective search space: 469908
Effective search space used: 469908
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_k18.g1 MSMg01no423_k18.g1 CHROMAT_FILE:
MSMg01no423_k18.g1 PHD_FILE: MSMg01no423_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:24 2005
(336 letters)
>mm_chr15_48543705_48544440
Length = 736
Score = 611 bits (316), Expect = e-179
Identities = 331/336 (98%)
Strand = Plus / Plus
Query: 1 attgattaactatagtaaaggtaaaactgttttctctctgagacatttttttaacatgat 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 attgattaactatagtaaaggtaaaactgttttctctctgagatatttttttaacatgat 260
Query: 61 taaaaaaaaagaatgaacattcactgaaatcaatactgtttctagaatgcaaatgaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaaaaaaagaatgaacattcactgaaatcaatactgtttctagaatgcaaatgaaata 320
Query: 121 ttattctcctttttgcctcattcaccacgattgaacatattaagttttatttatgaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ttattctcctttttgcctcattcaccacgattgaacatattaagttttatttatgaacaa 380
Query: 181 ctttgtagataattttccattaagacaaacactttcagcaaagcagcaagacacacattt 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 ctttgtagataattttccattaagacaaacactttcagcaaagcagcaggacacacattt 440
Query: 241 accatgcccaacatcaatagctcttctgtataccaataaggaactcaccaagaaagaaat 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccatgcccaaaatcaatagctcttctgtataccaataaggaactcaccaagaaagaaat 500
Query: 301 tatgaaactatcacatgtacaataactttgtagaaa 336
||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgaaactatcacatgtacaataactttgtagaaa 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
