Query= MSMg01no424_a23.b1 MSMg01no424_a23.b1 CHROMAT_FILE:
MSMg01no424_a23.b1 PHD_FILE: MSMg01no424_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:54 2005
(462 letters)
>mm_chr15_81534370_81535230
Length = 861
Score = 810 bits (419), Expect = 0.0
Identities = 445/455 (97%), Gaps = 4/455 (0%)
Strand = Plus / Minus
Query: 11 tatcagagatgggctatcattagaaagtaaaactcagccgggcgtggtggcacatgcctt 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 tatcagagatgggctatcattagaaagtaaaactcagccgggcgtggtggcacatgcctt 789
Query: 71 taatcccagcactcaggagacagaggcaggcagaattctgagtttgaggccagcctggtc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 taatcccagcactcaggagacagaggcaggcagaattctgagtttgaggccagcctggtc 729
Query: 131 tacaaagtgagttccaggacagccaggtctatacagaggaaccctgtctcataaaaacaa 190
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 728 tacaaagtgagttccaggacagccaggtctatacagaggaaccctgtctcaaaaaaacaa 669
Query: 191 aaacaaaaaaaaaa---cctctggccttaaccatgtgacttggagaagcagccaggggag 247
|||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 668 aaacaaaaaaaaaaaaacctctgcccttaaccatgtgacttggaggagcagccaggggag 609
Query: 248 tgttagctgtctggggtaacctggctctaggaccaggtggaaaaagcaccttggctggcc 307
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tgggagctgtctggggtaacctggctctaggaccaggtggaaaaagcaccttggctggcc 549
Query: 308 cagccctgttcttcatcctggggagggaaggccaggtcccctaatgcctgaaccacatgt 367
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 548 cagccctgttcttc-tcctggggagggaagggcaggtcccctaatgcctgaaccacatgt 490
Query: 368 tgggcctactctctgagggttttctaagacaggagtgtgtaatagggatggagccgggta 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgggcctactctctgagggttttctaagacaggagtgtgtaatagggatggagccgggta 430
Query: 428 agagatgctctgtgacttcccgaagtggctgcttg 462
|||||||||||||||||||||||||||||||||||
Sbjct: 429 agagatgctctgtgacttcccgaagtggctgcttg 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 861
Length adjustment: 10
Effective length of query: 452
Effective length of database: 851
Effective search space: 384652
Effective search space used: 384652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_a23.g1 MSMg01no424_a23.g1 CHROMAT_FILE:
MSMg01no424_a23.g1 PHD_FILE: MSMg01no424_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:54 2005
(464 letters)
>mm_chr15_81354859_81355722
Length = 864
Score = 890 bits (460), Expect = 0.0
Identities = 463/464 (99%)
Strand = Plus / Plus
Query: 1 actatggagattcaatacctttctctgcttcccgagtgctgggattaaaggaactagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actatggagattcaatacctttctctgcttcccgagtgctgggattaaaggaactagcaa 260
Query: 61 ccaagcccggctttttgttttgtttgtttttgagacttctctcatgagccggttttctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaagcccggctttttgttttgtttgtttttgagacttctctcatgagccggttttctct 320
Query: 121 aatgaggtctgtcccagaaatccaactcaggtgctttttggaagcattcacctgctgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgaggtctgtcccagaaatccaactcaggtgctttttggaagcattcacctgctgtag 380
Query: 181 ctgaaccaactcctgagctctgtatctttttctgtatctttgtatttatttattgaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaaccaactcctgagctctgtatctttttctgtatctttgtatttatttattgaggca 440
Query: 241 ggttctaaactaataggccttgacctcttaattttccccgctaccaccttcctagtgctg 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggttctaaactaacaggccttgacctcttaattttccccgctaccaccttcctagtgctg 500
Query: 301 agattacaaagaaacatactatgcccagtgacctgtctgtctctcagtcagtccctttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agattacaaagaaacatactatgcccagtgacctgtctgtctctcagtcagtccctttgt 560
Query: 361 ctgcagggtctcctgtagccaggttgacctggaactaaagtttttaaatatataaatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgcagggtctcctgtagccaggttgacctggaactaaagtttttaaatatataaatgtt 620
Query: 421 ttccctacagctatgcccgtgaaccatgtgtatgccctgccctt 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttccctacagctatgcccgtgaaccatgtgtatgccctgccctt 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
