Query= MSMg01no424_o17.b1 MSMg01no424_o17.b1 CHROMAT_FILE:
MSMg01no424_o17.b1 PHD_FILE: MSMg01no424_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:59 2005
(428 letters)
>mm_chr15_93864415_93865242
Length = 828
Score = 667 bits (345), Expect = 0.0
Identities = 406/443 (91%), Gaps = 28/443 (6%)
Strand = Plus / Plus
Query: 6 gaattctctttgcctcgctgcaactcttgtgggaaactttgtcctacactgaagagcatc 65
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gaattctctttgcattgctgcaactcttgtgggaaactttgtcctacactgaagagcatc 245
Query: 66 aaaaagctgttgaagggtacttgaaggtgcccttactgttgtatgaatatctctctctct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aaaaagctgttgaagggtacttgaaggtgcccttactgttgtatgaatatctctctctct 305
Query: 126 ctctctctctctctctctct--------------------ctctctctcacacacacaca 165
|||||||||||||||||||| | | | | ||||||||||||
Sbjct: 306 ctctctctctctctctctctcacacacacacacacacacacacacacacacacacacaca 365
Query: 166 catatatatatacacacatatacacacacacatatatacttatatattatgacaattagt 225
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 366 cacatatatatacacacatatacacacacacatatatacatatatattatgacaattagt 425
Query: 226 aatataatagaatatatataatatcaacagtagcaacagctttc----ttttattctgca 281
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 426 aatataatagaatatatataatatcaacagtagcaacagctttcccag----attctgca 481
Query: 282 gtcatgtaaacaaatgcatagagatgtctatcttactccattggaataaaaggaaaatcc 341
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtcatgtaaacaaacgcatagagatgtctatcttactccattggaataaaaggaaaatcc 541
Query: 342 aaatctcagaaatcaccacagttctgttactgttgcaatcccagacaccagtttattttt 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaatctcagaaatcaccacagttctgttactgttgcaatcccagacaccagtttattttt 601
Query: 402 aaattagcttctcaatcatcaag 424
|||||||||||||||||||||||
Sbjct: 602 aaattagcttctcaatcatcaag 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_o17.g1 MSMg01no424_o17.g1 CHROMAT_FILE:
MSMg01no424_o17.g1 PHD_FILE: MSMg01no424_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:59 2005
(248 letters)
>mm_chr15_94033853_94034502
Length = 650
Score = 377 bits (195), Expect = e-109
Identities = 235/253 (92%), Gaps = 10/253 (3%)
Strand = Plus / Minus
Query: 1 tatttgctcttctctacaactggaaacaaagacacaaccattaaattaaacggaatggaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tatttgctcttctttacaactggaaacaaagacacaaccattaaattaaacggaatggaa 390
Query: 61 tttgctattagaaataaaactttaaaaaaaaaaac--caaa----caaaaggccccgaat 114
|||||||||||||||||||||| ||||||||||| |||| |||||||||| ||||
Sbjct: 389 tttgctattagaaataaaacttaaaaaaaaaaaaaaacaaaaaaacaaaaggccctgaat 330
Query: 115 cagtctgtgatggcaggaattcagcacagaagaagataagtgggtgtgtgtgtgtttatg 174
|||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||
Sbjct: 329 cagtctgtgatgccaggaattcagcacagaagaaggtaactg----tgtgtgtgtttatg 274
Query: 175 gtaagaagtgcacacggttgcatgcttctgttgaagtggaccttgtaaatctcagcctca 234
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gtaagaagtgcacacagttgcatgcttctgttgaagtggaccttgtaaatctcagcctca 214
Query: 235 tgccttatcctta 247
|||||||||||||
Sbjct: 213 tgccttatcctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 650
Length adjustment: 9
Effective length of query: 239
Effective length of database: 641
Effective search space: 153199
Effective search space used: 153199
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|