TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGGAATTC
TGTTATTGTCTTCCACAGTTTGGATGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGAGAGACAGAGAGAGAGAGACAGANATACCCTCCCCCAACCCG
CCACACACCCCCTCCTCTCTCCTTTTACTTCATCTTTTCTATTTTCTTTC
ACCCTGTCTTCTCTTTCTTATTCCTTCCCTCCTCTTCTTCCTCTTTTTTT
CCTTCTCTATCCCGCTCACCCGCCTTCTCTCCATCTTCACTCCTCCATCC
CCCCCCCCCCTCTTTTTTTTTTTCCCACCTCTCTTACCTTTCCCCCTCCC
CCTTTTTTTTTCTCTCCTTCCTTCCCCTCCGCATTTTCCCTCTCTCTCTC
TTACCCTCCTTTTCCCTCCTCCTCCTTGTTCTTTCTCCTTTTTTTCTTCC
CCTTCTTTTCTTTCCCCCTTTTTTCTTTCCCCTCTTCTTCTTCTCCCCTT
CTTTCCCCTTCTTCTTTCTTTTTCCTTCTTTTTCTCTCCCCTCCTTCCCT
CTCCTCTCCTCCCCTCCCTCCTTCTTTTTTCCCCTTCTTTCTTTCTTTAC
TTCCTTCTCTCTCCTTTTCTCCCTCTCTTTTCCCCTTTTTTACCCTTTTC
TTTCTCTCTTCTCCTTTCTTTTCTTTTTCTTTTTTCTTCTTTCTTTCTCC
TCTCACCTCTCTTTTCTTTCCTTCTCCCCCTTTCCTTTCTTTTTTTCCTT
TCCTTCCTCATTTTTCTTCCTCCTCCTCCCTTTCTTCCCTCCTTCCCCN

NCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAAGATTAGATTGATTATCAAAGT
CCCCACGCTATGCTTCAGGGTCATTTTCAGGAAATGAAAGATATATACAT
AAAGGAGGCTCCAGGAAGGAGCTGAGGTAACCAACAGCATCACTGGCATA
ATTGTCAATGACACTGTTTTTATTTTTTATTTTGCCCACGTGGAAAAATG
TCTTTGTGCCTTCTCTATCCAATTCACCCACTTTATTTTTATTTAAGGAA
TTATCTGTCTTTTCTTCATGATTAATATCCTTACTATCTTACTAAGTATT
TGAACAATATGAAACAATGCCCAAGTGACCCTAAAATTGAATGGGGTTCC
CTGGTTTCTGCTCTATATTTCTCACTTCTTGTGAGGGTCCCTACTTCCTT
TTCTTCTAGCTGATGTCTGGTCCCTGTTTAGGCAACACTTGTATACCACT
CTAAAACAATTAAAACTGAAAAAAAAATATAGAATAGAATAACACAGAAT
AAAGTTTGTAATAGTAAACTTTATTCAGAGAATCATATTGATATACCTGG
AAAGTTCCTGAAAGCATAGTCCAAGAAAAATTCCTAGNTTTATTTTGGTT
TGGTTTGGTTTGGTTTGTTTTATCTTTTTAACAAACTGTGTCACAAGAAT
TTTCTTTGAATCTGGGAGTTTATCACAAGCACGATAATTCTCCCCCATGA
AACCTTCCTGGAG

Query= MSMg01no424_o24.g1 MSMg01no424_o24.g1 CHROMAT_FILE:
MSMg01no424_o24.g1 PHD_FILE: MSMg01no424_o24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:01 2005
         (526 letters)



>mm_chr15_17553101_17554018
          Length = 918

 Score =  955 bits (494), Expect = 0.0
 Identities = 515/526 (97%), Gaps = 8/526 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagattagattgattatcaaagtccccacgctatgcttcagggtcattttcaggaaatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagattagattgattatcaaagtccccacgctatgcttcagggtcattttcaggaaatga 260

                                                                       
Query: 61  aagatatatacataaaggaggctccaggaaggagctgaggtaaccaacagcatcactggc 120
           ||||||||      ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagatata------aaggaggctccaggaaggagctgaggtaaccaacagcatcactggc 314

                                                                       
Query: 121 ataattgtcaatgacactgtttttattttttattttgcccacgtggaaaaatgtctttgt 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 315 ataattgtcaatgacactgtttttagtttttattttgcccacgtggaaaaatgtctttgt 374

                                                                       
Query: 181 gccttctctatccaattcacccactttatttttatttaaggaattatctgtcttttcttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gccttctctatccaattcacccactttatttttatttaaggaattatctgtcttttcttc 434

                                                                       
Query: 241 atgattaatatccttactatcttactaagtatttgaacaatatgaaacaatgcccaagtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atgattaatatccttactatcttactaagtatttgaacaatatgaaacaatgcccaagtg 494

                                                                       
Query: 301 accctaaaattgaatggggttccctggtttctgctctatatttctcacttcttgtgaggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 accctaaaattgaatggggttccctggtttctgctctatatttctcacttcttgtgaggg 554

                                                                       
Query: 361 tccctacttccttttcttctagctgatgtctggtccctgtttaggcaacacttgtatacc 420
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tccctacttacttttcttctagctgatgtctggtccctgtttaggcaacacttgtatacc 614

                                                                       
Query: 421 actctaaaacaattaaaactgaaaaaaaaatatagaatagaataacacagaataaagttt 480
           ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||
Sbjct: 615 actctaaaacaattaaaactgaaaaaaa--tatagaatagactaacacagaataaagttt 672

                                                         
Query: 481 gtaatagtaaactttattcagagaatcatattgatatacctggaaa 526
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gtaatagtaaactttattcagagaatcatattgatatacctggaaa 718


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 918
Length adjustment: 10
Effective length of query: 516
Effective length of database: 908
Effective search space:   468528
Effective search space used:   468528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)