Query= MSMg01no426_b10.b1 MSMg01no426_b10.b1 CHROMAT_FILE:
MSMg01no426_b10.b1 PHD_FILE: MSMg01no426_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:29 2005
(441 letters)
>mm_chr15_21094432_21095272
Length = 841
Score = 714 bits (369), Expect = 0.0
Identities = 418/440 (95%), Gaps = 11/440 (2%)
Strand = Plus / Plus
Query: 1 gatactagggagagagccacaaattaagtttgtactgaatatgtagatggcagtacatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatactagggagagagccacaaattaagtttgtactgaatatgtagatggcagtacatag 260
Query: 61 aaacatagtcttggggtaattggcagactattagaaaaataaaaaccagacacaaatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacatagtcttggggtaattggcagactattagaaaaataaaaaccagacacaaatagc 320
Query: 121 atgacttgtgcacttaaggtaagaaatttaagttaggagagaagaaaggacagatgaaca 180
||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 321 atgacttgtgcacttaaggtaagaaatttaagttaggagagaaaaaaagagagatgaaca 380
Query: 181 gatgtcctggaatagtagcctggttattctgatcactgctgcctgatgggctctatttac 240
|| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacgtcctggaatggtagcctgtttattctgatcactgctgcctgatgggctctatttaa 440
Query: 241 attttctaaaaatgtcagttttgatgatacctatggctataatcatcatcgtcatcgtca 300
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 441 attttctaaaaatgtcagttttgatgatacctatggctataatcattatcgtcatcatca 500
Query: 301 t---caacaccaccaccaccaccaccactgtctttcttgacatagcaaatcagggtgatt 357
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaccaccaccaccaccaccaccaccactgtctttcttgacatagcaaatcagggtgatt 560
Query: 358 ccaatttgaaattattttt--gagtgtactttgtgtgtgtgtgtgtgtatgtgcatgtat 415
||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 561 ccaatttgaaattatttttatgagtgtactttgtgtgtgtgtgtgtg------catgtat 614
Query: 416 gcnctcatatatatatatat 435
|| |||||||||||||||||
Sbjct: 615 gcactcatatatatatatat 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_b10.g1 MSMg01no426_b10.g1 CHROMAT_FILE:
MSMg01no426_b10.g1 PHD_FILE: MSMg01no426_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:29 2005
(446 letters)
>mm_chr15_21276475_21277319
Length = 845
Score = 706 bits (365), Expect = 0.0
Identities = 396/420 (94%), Gaps = 23/420 (5%)
Strand = Plus / Minus
Query: 30 tccaagttcagccaagggaaggaaacatagatttactgtgttgattgtttactgaccctg 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 tccaagttcagccaagggaaggaaacatagatttactgtgttgattgtttactgaccctg 786
Query: 90 gacagtggggataaatatctacttgctctgagtcacgtcctttaaccttttaaatggtat 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gacagtggggataaatatctacttgctctgagtcacgtcctttaaccttttaaatggtat 726
Query: 150 aatgaagttgtctttccttccttccttccttccttccttccttccttccttccttccttc 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 aatgaagttgtctttccttccttccttccttccttccttccttccttccttccttccttc 666
Query: 210 cttccttccttgcttccttccttccctcctcccttcattttcttgcttttgtctttattt 269
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 665 cttccttcc----------------ctcctcccttcattttcttgcttttgtctttattt 622
Query: 270 ttgctttgctagggagtaaactcagtg---catgtataaggaacaaactctctacaaagt 326
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 ttgctttgctagggagtaaactcagtgtttcatgtataaggaacaaactctctacaaagt 562
Query: 327 aagtttcaaccaaagtccttttgagggactaatttaattaatgtgattacttttcttctt 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ----ttcaaccaaagtccttttgagggactaatttaattaatgtgattacttttcttctt 506
Query: 387 aagcttacttggaaggaaactgtacctganatgtgtgtacaccacaaagaaaggatgggc 446
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 aagcttacttggaaggaaactgtacctgaaatgtgtgtacaccacaaagaaaggatgggc 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 845
Length adjustment: 10
Effective length of query: 436
Effective length of database: 835
Effective search space: 364060
Effective search space used: 364060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
