Query= MSMg01no427_f07.b1 MSMg01no427_f07.b1 CHROMAT_FILE:
MSMg01no427_f07.b1 PHD_FILE: MSMg01no427_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:10 2005
(566 letters)
>mm_chr15_30193390_30194355
Length = 966
Score = 1038 bits (537), Expect = 0.0
Identities = 555/561 (98%)
Strand = Plus / Minus
Query: 6 aattcatctatatttccaaactgtacacattttttgtacctatagggaatgatctgaaat 65
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 aattcatctatattttcaaactgtacacattttttgtacctatagggaatgatctgaaat 707
Query: 66 cctgtgcaagaaaataaagatacctttgcctcacagaatactgagtgtccaacggacatg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 cctgtgcaagaaaataaagatacctttgcctcacagaatactgagtgtccaacggacatg 647
Query: 126 catttattaaaagatgtaagggctgatggaagtccaagtctacatgggtggggcaccatt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 catttattaaaagatgtaagggctgatggaagtccaagtctacatgggtggggcaccatt 587
Query: 186 aaggaatggaaacatttacaatttgatgggctggttgctaatttacacagttaagtcaca 245
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aaggaatggaaacatttacattttgatgggctggttgctaatttacacagttaagtcaca 527
Query: 246 gttctttaacatcaaatctgttagagaatgtataaatgatatagatcaggtatgtctaaa 305
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 526 gttctttaacatcaaatctgttagagaatgtagaaatgatatagatcaggtatgtctaaa 467
Query: 306 actgacattaaagtttgtagcaatgacaactgcaagcagatatgtggaggaagctgtata 365
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 attgacattaaagtttgtagcaatgacaactgcaagcagatatgtggaggaagctgtata 407
Query: 366 gagctacagtaaagtagtgcaaagagcacctggtcagtggaaaaagaagtccaccaagta 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gagctacagtaaagtagtgcaaagagcacctggtcagtggaaaaagaagtccaccaagta 347
Query: 426 agcaatgagtacctgctcatcagagctaaggtgtcggcactcacattcacgctcaatgtt 485
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agtaatgagtacctgctcatcagagctaaggtgtcggcactcacattcacgctcaatgtt 287
Query: 486 gtaatggacaaacgacaacagtcttcctacccaagccccagccttactctaagccagacc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtaatggacaaacgacaacagtcttcctacccaagccccagccttactctaagccagacc 227
Query: 546 acagtcatccaaatggataac 566
|||||| ||||||||||||||
Sbjct: 226 acagtcgtccaaatggataac 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_f07.g1 MSMg01no427_f07.g1 CHROMAT_FILE:
MSMg01no427_f07.g1 PHD_FILE: MSMg01no427_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:10 2005
(523 letters)
>mm_chr15_30042513_30043437
Length = 925
Score = 1004 bits (519), Expect = 0.0
Identities = 523/525 (99%), Gaps = 2/525 (0%)
Strand = Plus / Plus
Query: 1 tttaagaatggtaagcaatgttgcaatacatctttagcatatttattcctttactcctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaagaatggtaagcaatgttgcaatacatctttagcatatttattcctttactcctcc 260
Query: 61 tagacccaccatgccttccatctcccacaacttcatgtcctcttttgatttattttaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagacccaccatgccttccatctcccacaacttcatgtcctcttttgatttattttaata 320
Query: 121 gttcaccaagtcgagtttttgctgcccatgtacttaaagatgtggcctcatgcactggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttcaccaagtcgagtttttgctgcccatgtacttaaagatgtggcctcatgcactggag 380
Query: 181 tgttgtcacattaccagaggccacacttgtaacaaaattgacttttcctctcttcattag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttgtcacattaccagaggccacacttgtaacaaaattgacttttcctctcttcattag 440
Query: 241 tggagtggtcctgtcaatttagggcccttaacaccaaggacattaaattatatcttataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggagtggtcctgtcaatttagggcccttaacaccaaggacattaaattatatcttataa 500
Query: 301 atctatagaaaataataacgttaaaacgttgcttagtataaattataggattagaagtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atctatagaaaataataacgttaaaacgttgcttagtataaattataggattagaagtta 560
Query: 361 agaactcagaggatatttcagacccaaatatgtttttactttcccaaatgggattaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaactcagaggatatttcagacccaaatatgtttttactttcccaaatgggattaaaat 620
Query: 421 gtgttaattgggcggtttcttttaaatctcagaaaaagaacacacacac--cctgataat 478
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 gtgttaattgggcggtttcttttaaatctcagaaaaagaacacacacacaccctgataat 680
Query: 479 agtagaataaaaatttttaggaaaaatcaatccaaccaggaaata 523
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtagaataaaaatttttaggaaaaatcaatccaaccaggaaata 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 925
Length adjustment: 10
Effective length of query: 513
Effective length of database: 915
Effective search space: 469395
Effective search space used: 469395
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
