Query= MSMg01no427_j08.b1 MSMg01no427_j08.b1 CHROMAT_FILE:
MSMg01no427_j08.b1 PHD_FILE: MSMg01no427_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:29 2005
(512 letters)
>mm_chr15_81418783_81419694
Length = 912
Score = 936 bits (484), Expect = 0.0
Identities = 504/513 (98%), Gaps = 4/513 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacatcaccttcctctacctcccaagtgctggatttaaaggcaggtgccaccag 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacatcaccagcctctacctcccaagtgctggatttaaaggcaggtgccaccag 263
Query: 64 gaccaccaacttctagagtcttaaaaaatttcaatactgagattggtttattcttagtag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaccaccaacttctagagtcttaaaaaatttcaatactgagattggtttattcttagtag 323
Query: 124 taaggattatagtaatattagtaatttttcttctcttaacattgtagtgacggttaaatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taaggattatagtaatattagtaatttttcttctcttaacattgtagtgacggttaaatt 383
Query: 184 ttttttcttttaaaatttatataccattaggtcggttttattttgttttgagacagggtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttttttcttttaaaatttatataccattaggtcggttttattttgttttgagacagggtt 443
Query: 244 tttgtagctctgactatcctagaactctccatgttgataatactgcccttaagctcacag 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 tttgtagctctgactatcctagaactctccatgttgataagactgcccttaagctcacag 503
Query: 304 agccacctgcttctgcctcctgtttgctggggttaaaggcctgtgtctcaaggacctgct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agccacctgcttctgcctcctgtttgctggggttaaaggcctgtgtctcaaggacctgct 563
Query: 364 tgtttcttttcctttttttttttttttttttt----aanttgatacagggtatcactaca 419
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 564 tgtttcttttccttttttttttttttttttttttttaatttgatacagggtatcactaca 623
Query: 420 tagccctgactggcctacaatctagagagaaatgattgactctgcctcccttccccatgg 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 624 tagccctgactggcctacaatctagagagaaatgattgactctgcctcccttcctcatgg 683
Query: 480 tgggattaaaggtgtgtgccaccaagcccaaca 512
|||||||||||||||||||||||||||||||||
Sbjct: 684 tgggattaaaggtgtgtgccaccaagcccaaca 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_j08.g1 MSMg01no427_j08.g1 CHROMAT_FILE:
MSMg01no427_j08.g1 PHD_FILE: MSMg01no427_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:30 2005
(478 letters)
>mm_chr15_81574893_81575769
Length = 877
Score = 909 bits (470), Expect = 0.0
Identities = 476/478 (99%), Gaps = 1/478 (0%)
Strand = Plus / Minus
Query: 1 accttgattttcttttaaaactgctcttccttttctgggatttccttctagcagttctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 accttgattttcttttaaaactgctcttccttttctgggatttccttctagcagttctgc 431
Query: 61 atttctgggcggatgctggaccgacctctgttttgtttttccacccctcaaaccgagcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atttctgggcggatgctggaccgacctctgttttgtttttccacccctcaaaccgagcgt 371
Query: 121 aaagctacacttggctttccaggtgttttgatgaaggaaggcatctccaagcatctggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaagctacacttggctttccaggtgttttgatgaaggaaggcatctccaagcatctggtc 311
Query: 181 atgttgtgccctttctttgataagaacctcggtcaggatctcctttttggctagggtttc 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 310 atgttgtgccctttctttgataaggacctcggtcaggatctcctttttggctagggtttc 251
Query: 241 atgtatagaaagttaaaagcgggttgggggcggggggggcgcagggggaaatcagtgaca 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 250 atgtatagaaagttaaaagcgggttgggggc-gggggggcgcagggggaaatcagtgaca 192
Query: 301 cttgtttaagaaagcctggctgattttattcaaggtagggctatcatgatgggtttaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cttgtttaagaaagcctggctgattttattcaaggtagggctatcatgatgggtttaggg 132
Query: 361 accattgcagtggggttttgcagtggtgctgagacactgggctcagccctgaattcagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 accattgcagtggggttttgcagtggtgctgagacactgggctcagccctgaattcagca 72
Query: 421 tgaaccgggaatttatagagcaaggagcaaggcagggtcagcagacagaaaacttgag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgaaccgggaatttatagagcaaggagcaaggcagggtcagcagacagaaaacttgag 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 877
Length adjustment: 10
Effective length of query: 468
Effective length of database: 867
Effective search space: 405756
Effective search space used: 405756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
