Query= MSMg01no429_d05.b1 MSMg01no429_d05.b1 CHROMAT_FILE:
MSMg01no429_d05.b1 PHD_FILE: MSMg01no429_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:36 2005
(519 letters)
>mm_chr15_89753107_89754026
Length = 920
Score = 948 bits (490), Expect = 0.0
Identities = 510/517 (98%), Gaps = 1/517 (0%)
Strand = Plus / Plus
Query: 4 ggaattca-caagtaatagcattcaattagcttatctcctttttaaggtatagagaggta 62
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaacaagtaatagcattcaattagcttatctcctttttaaggtatagagaggta 263
Query: 63 tagttgaagactctagtctacagagctactcattatggctatgacaaagtaagaaagaag 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 264 tagttgaagactctagtctacagagctactcattatggctatgacaaagtaagacagaag 323
Query: 123 agttgatgagacacttctaatggaacatctgtcaacattagctgaagcagagacaggaag 182
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agttgatgagacatttctaatggaacatctgtcaacattagctgaagcagagacaggaag 383
Query: 183 tctaggattcacaaccaaaatgacattcagcatgtgttacaacttactgcttgacatttg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctaggattcacaaccaaaatgacattcagcatgtgttacaacttactgcttgacatttg 443
Query: 243 gcatttattgcaacttactgccctgttccatttggtttgctcggctacttttctgacaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcatttattgcaacttactgccctgttccatttggtttgctcggctacttttctgacaaa 503
Query: 303 gcctaggcccaccaggccaggactggactgctgagcccacttaaaataataagaaaattc 362
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcctaggcccaccaggccagggctggactgctgagcccacttaaaataataagaaaattc 563
Query: 363 tcaggcagacagtggtggtacacacctttaatctcaacattcaggaagcagaggcaagca 422
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 564 tcaggcagacagtggtggtacacacctttaatctcaacactcaggaagcagaggcaagca 623
Query: 423 gatctcttaagtttgaggccagcctggtctagaaagagagttccaggacagcaaagctac 482
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 624 gatctcttaagtttgaggccagcctggtctagagagagagttccaggacagcaaagctac 683
Query: 483 cctatctcanacaacaacaacaacaacaacaacaaca 519
||||||||| |||||||||||||||||||||||||||
Sbjct: 684 cctatctcaaacaacaacaacaacaacaacaacaaca 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space: 463190
Effective search space used: 463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_d05.g1 MSMg01no429_d05.g1 CHROMAT_FILE:
MSMg01no429_d05.g1 PHD_FILE: MSMg01no429_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:36 2005
(355 letters)
>mm_chr15_89924669_89925423
Length = 755
Score = 640 bits (331), Expect = 0.0
Identities = 349/355 (98%)
Strand = Plus / Minus
Query: 1 tctataagttcactttgcattcagtctcacggagtttaggggcgattaggcggtgtcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tctataagttcactttgcattcagtctcacggagtttaggggcgattaggcggtgtcatt 496
Query: 61 tctgaagtgacacatgaagacttagtggttctcgttcacagaaacgtgagatcaatcaaa 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 495 tctgaagtgacacatgaagacttagtggttctggttcacagaaacgtgagatcaatcaaa 436
Query: 121 aattgaaaacacaaagttacatatttttttccgccatcatggccatatctctacagctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aattgaaaacacaaagttacatatttttttccgccatcatggccatatctctacagctaa 376
Query: 181 taaatgcttccaccagtcttggggtaggggtgctcactggaacacacgtctatgtttaca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gaaatgcttccaccagtcttggggtaggggtgctcactggaacacacgtctatgtttaca 316
Query: 241 catgccttgtgtattggcccttgatgtaaaacttccagcctttcagggatgatgctgcag 300
||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 315 catgccttgtgcatcggcccttgatgtgaaacttccagcctttcagggatgatgctgcag 256
Query: 301 acaagagagacctgcaccagaaagatgtgagtgttgctcttacagctatgctatc 355
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acaggagagacctgcaccagaaagatgtgagtgttgctcttacagctatgctatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
