XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTGA
ATATTCAACAGTTTAATTACCACTGAAAATGAGACAAGAAGGAGTTTATA
GAGCCAAAGATGGTAGAAAACTGCCCTGCATCCAGATGCATGAGCCATCT
GTTAGAGAACCAGATAATACCTGGAATAAGAATTCAGTAAATTTCACCAG
AGACTATGAAAGCCAGAAGAGCCTGGACATATGTTATACAGACACTAAGA
GAACACAAATGCCAGCCCAGGCTAATATACCTGGCCAAACTCTCAATTAC
CATAGATGGAGAAACCAAAGTATTCCACGACAAAACCAAATTCACACAAT
ATCTTTCCACGAATCCAGCCCTTCAAAGGATAATAACAGAAAAGAAGCAA
TACAAGGACGGAAATCACGCCCTAGAACAACCAAGAAAGTAATCATTCAA
CAAACCAAAAAGAAGACAGCCACAAGAACAGAATGCCAACTCTAACAACA
AAAATAAAAGGAAGCAACAATTACTTTTTCTTAATATCTCTTAATATCAA
TGGACTCAATTCCCCAATAAAAAGGCATAGACTAACAGACTGGCTACACA
AACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGGGAAAAA
GACAGACACTACCTCAGAGTGAAAAGCTGGAAAACAATTTTTCCAGCCAA
TGGACTGAAGAAACCAGCTGGAGTAGCCCTTTTAATATCGGATAAN

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGCAGCTGAGTTCTTTTGTGAGTTGGTGC
AGTTCAGTGCAGATCAACAGAGGCAGTTGAAGCCAGAGAATAATAAGGAG
TCAGAGAATGTGAACAAATTGCTAGAATTAGCTTAAGGTCAAGCAGAGAA
TTTCAGTGAGAAGCTGAGTGAAGTCAGATTGAATCAGTCAGCTTGGGAGG
GAGCTTGGGTCAGAACAGGGGGGTTGAACCAGTCAGCCAAAGTTCAGAAA
GAACTAGAAAGGGTGATTTTATTCAGCACTAAGCCTCCAAGATGACAATT
ACATCAGGCCAATAAAAAATACTTTTACAAGAAATACAACAGAGCACAAT
AGTTGTTCTTACTGTATCTTATCTTTGTTATGTTTAAGCAATGGAAATGA
AGGTCTAGTATAGGGCGTTATTGATACCCAGATGTATATTATTGTAATAG
AGGTATTGGCAAGCTTTTGTACATAGAGCAGAGGACAATGTTTTTTCTCC
AAGAACTCATAAGTCATTACATTGACTTTGAAACACTGTTGTCATTCTGA
GTCATTTGTTTGGTTGTTTGCTTGCTTATTTATTTATTTAACTGCGTGCC
TCTGCGTGGGCATTGTTGCTTGGACCCTCTGTTCCATTTTCCCAACCATT
GGTTTTGGCCCCTATA

Query= MSMg01no429_f04.b1 MSMg01no429_f04.b1 CHROMAT_FILE:
MSMg01no429_f04.b1 PHD_FILE: MSMg01no429_f04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:46 2005
         (620 letters)



>mm_chr15_14400479_14401498
          Length = 1020

 Score =  277 bits (143), Expect = 2e-78
 Identities = 149/151 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttgaatattcaacagtttaattaccactgaaaatgagacaagaaggagtttat 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaattccttgaacattcaacagtttaattaccactgaaaatgagacaagaaggagtttat 281

                                                                       
Query: 65  agagccaaagatggtagaaaactgccctgcatccagatgcatgagccatctgttagagaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 agagccaaagatggtagaaaactgccctgcatccagatgcatgagccatctgttagagaa 221

                                          
Query: 125 ccagataatacctggaataagaattcagtaa 155
           ||||||| |||||||||||||||||||||||
Sbjct: 220 ccagatagtacctggaataagaattcagtaa 190


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space:   616100
Effective search space used:   616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no429_f04.g1 MSMg01no429_f04.g1 CHROMAT_FILE:
MSMg01no429_f04.g1 PHD_FILE: MSMg01no429_f04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:46 2005
         (534 letters)



>mm_chr15_14205929_14206862
          Length = 934

 Score = 1017 bits (526), Expect = 0.0
 Identities = 532/534 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcagctgagttcttttgtgagttggtgcagttcagtgcagatcaacagaggcagttgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagctgagttcttttgtgagttggtgcagttcagtgcagatcaacagaggcagttgaa 260

                                                                       
Query: 61  gccagagaataataaggagtcagagaatgtgaacaaattgctagaattagcttaaggtca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccagagaataataaggagtcagagaatgtgaacaaattgctagaattagcttaaggtca 320

                                                                       
Query: 121 agcagagaatttcagtgagaagctgagtgaagtcagattgaatcagtcagcttgggaggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcagagaatttcagtgagaagctgagtgaagtcagattgaatcagtcagcttgggaggg 380

                                                                       
Query: 181 agcttgggtcagaacaggggggttgaaccagtcagccaaagttcagaaagaactagaaag 240
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcttgggtcagaacagctgggttgaaccagtcagccaaagttcagaaagaactagaaag 440

                                                                       
Query: 241 ggtgattttattcagcactaagcctccaagatgacaattacatcaggccaataaaaaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgattttattcagcactaagcctccaagatgacaattacatcaggccaataaaaaata 500

                                                                       
Query: 301 cttttacaagaaatacaacagagcacaatagttgttcttactgtatcttatctttgttat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttttacaagaaatacaacagagcacaatagttgttcttactgtatcttatctttgttat 560

                                                                       
Query: 361 gtttaagcaatggaaatgaaggtctagtatagggcgttattgatacccagatgtatatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtttaagcaatggaaatgaaggtctagtatagggcgttattgatacccagatgtatatta 620

                                                                       
Query: 421 ttgtaatagaggtattggcaagcttttgtacatagagcagaggacaatgttttttctcca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtaatagaggtattggcaagcttttgtacatagagcagaggacaatgttttttctcca 680

                                                                 
Query: 481 agaactcataagtcattacattgactttgaaacactgttgtcattctgagtcat 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaactcataagtcattacattgactttgaaacactgttgtcattctgagtcat 734


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space:   484176
Effective search space used:   484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)