Query= MSMg01no432_d14.b1 MSMg01no432_d14.b1 CHROMAT_FILE:
MSMg01no432_d14.b1 PHD_FILE: MSMg01no432_d14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:52 2005
(174 letters)
>mm_chr15_84434721_84435294
Length = 574
Score = 323 bits (167), Expect = 4e-93
Identities = 170/171 (99%)
Strand = Plus / Minus
Query: 1 tcatttggagactacacttctccctagaacttaccatcctccttctcccatgacctgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tcatttggagactacacttctccctagaacttaccatcctccttctcccatgacctgctc 312
Query: 61 gctgggcatcctcagggcctgcccattgaaagtgccagctctgagttttgctgtggggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gctgggcatcctcagggcctgcccattgaaagtgccagctctgagttttgctgtggggtg 252
Query: 121 gctggtgctggtgggccaagcagctcgttaggtggagtggggtgagaagtg 171
||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 251 gctggtgctggtgggccaagcagctcggtaggtggagtggggtgagaagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no432_d14.g1 MSMg01no432_d14.g1 CHROMAT_FILE:
MSMg01no432_d14.g1 PHD_FILE: MSMg01no432_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:52 2005
(376 letters)
>mm_chr15_84305568_84306343
Length = 776
Score = 598 bits (309), Expect = e-175
Identities = 357/381 (93%), Gaps = 16/381 (4%)
Strand = Plus / Plus
Query: 1 cattgagatgtttggtttttcctgagagtcaggatcccttgaagatttcttgtagggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattgagatgtttggtttttcctgagagtcaggatcccttgaagatttcttgtagggatg 260
Query: 61 tcaccaggctcctgagctctcaattaccatcgccctggtatctggaagcatttggagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaccaggctcctgagctctcaattaccatcgccctggtatctggaagcatttggagcct 320
Query: 121 ttctccagcaccatccaaaccagatgccttgggcaacattaatgaagtgttgatgcttga 180
| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 321 tcctccagcaccatccaaaccagatgccttgggcagcattaacgaagtgttgatgcttga 380
Query: 181 acatcaggaaccagtttcctgcttgagagagggaatggactgcagctgtccctgccaaag 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 acatcaggaaccagtttcctgcttgagagagggaatggattgcagctgtccctgcct--- 437
Query: 241 acaactgtgaatatttttt-----cctgcaaggtagccttggggaaagtgacatggctct 295
| |||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 438 -c--ctgtgagtat-----aggaccctgcaaggtagccttggggaaagtgacatggctct 489
Query: 296 gattctgagagaaatggctagagctggggttccagtgcaggaccctatggcgaaaggtgt 355
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 490 gattctgggagaaatggctagagctggggttccagtgcaggaccctatggggaaaggtgt 549
Query: 356 gaccgttccttggtggttaca 376
|||||||||||||||||||||
Sbjct: 550 gaccgttccttggtggttaca 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
