Query= MSMg01no432_h23.b1 MSMg01no432_h23.b1 CHROMAT_FILE:
MSMg01no432_h23.b1 PHD_FILE: MSMg01no432_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:14 2005
(401 letters)
>mm_chr15_51785242_51786043
Length = 802
Score = 731 bits (378), Expect = 0.0
Identities = 393/400 (98%), Gaps = 5/400 (1%)
Strand = Plus / Minus
Query: 5 gaattcatgagatttt---cacataacaaactctagaagggttctttccacctgactggc 61
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gaattcatgaga--ttccacacataacaaactctagaagggttctttccacctgactggc 545
Query: 62 tctcagcagcaggcgacttctggctccctctgccttcctcacaaagggttactgaaggag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tctcagcagcaggcgacttctggctccctctgccttcctcacaaagggttactgaaggag 485
Query: 122 gctcactgggaagtcaaggttgaaccccaaaaggacatcctcaaggatgatgatccacaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gctcactgggaagtcaaggttgaaccccaaaaggacatcctcaaggatgatgatccacaa 425
Query: 182 gcatcaaaccagtgacttagtgatctgaataaacgagggatgctttcaagggaccagtag 241
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gcatcaaaccagtggcttagtgatctgaataaacgagggatgctttcaagggaccagtag 365
Query: 242 ttagtgagtgctcctgagaagtcttggtgactagagttatggcagagcttagagacccat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttagtgagtgctcctgagaagtcttggtgactagagttatggcagagcttagagacccat 305
Query: 302 gcattctcaaactgcccaaaatgatcactacagaggtttgggaataagtgacgttataag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gcattctcaaactgcccaaaatgatcactacagaggtttgggaataagtgacgttataag 245
Query: 362 gaatcacaaacccagacttttacagttccgggaaaatcaa 401
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 244 gaatcacaaacccagacttttacagttccaggaaaatcaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 802
Length adjustment: 9
Effective length of query: 392
Effective length of database: 793
Effective search space: 310856
Effective search space used: 310856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_h23.g1 MSMg01no432_h23.g1 CHROMAT_FILE:
MSMg01no432_h23.g1 PHD_FILE: MSMg01no432_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:14 2005
(383 letters)
>mm_chr15_51628159_51628942
Length = 784
Score = 698 bits (361), Expect = 0.0
Identities = 379/385 (98%), Gaps = 3/385 (0%)
Strand = Plus / Plus
Query: 1 ttaacttttcagtgactctgacatcgccactgtgaggtacttgatagaatgcacacttaa 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaacttttcagtgactctgacattgccactgtgaggtacttgatagaatgcacacttaa 260
Query: 61 aggagctgcaaagggcagcgccctccacaccacagaagggtgcttccaagagagcagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggagctgcaaagggcagcgccctccacaccacagaagggtgcttccaagagagcagtca 320
Query: 121 caggagccttacactggcagagcacaggcggagcacagtct-ctcttagcctggctacag 179
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 321 caggagccttacactggcagagcacaggcggagcacag-cttctcttagcctggctacag 379
Query: 180 ctccacacttagagcttcgagactcagcttgtcttctaagaatctacacatttttaggag 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctccatacttagagcttcgagactcagcttgtcttctaagaatctacacatttttaggag 439
Query: 240 tcagtgggaaactagtccaacatgaagtttcatatgaaataaaaaaacttcacaattaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcagtgggaaactagtccaacatgaagtttcatatgaaataaaaaaacttcacaattaca 499
Query: 300 gaagaattgtaaatattttttt-gaaaaaagtattcccatactacgaagccagatcacag 358
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 500 gaagaattgtaaatattttttttgaaaaaaatattcccatactacgaagccagatcacag 559
Query: 359 aacagttaattaccccctaagtttc 383
|||||||||||||||||||||||||
Sbjct: 560 aacagttaattaccccctaagtttc 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 784
Length adjustment: 9
Effective length of query: 374
Effective length of database: 775
Effective search space: 289850
Effective search space used: 289850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
