MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-434I05
Chromosome	15 (Build37)
Map Location	22,262,748 - 22,262,995
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cdh12, LOC100040351
Downstream gene	EG545091, Cdh18
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cdh12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215654 MGI:109503
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040351 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040351
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	EG545091 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545091 MGI:3645633
definition	note : predicted gene, EG545091 pseudo : _no_value

name	Cdh18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320865 MGI:1344366
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Cdh12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56606024 GeneID:215654 MGI:109503
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cadherin 12 transcript_id : NM_001008420.1

name	LOC100040351 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266438 GeneID:100040351
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : hypothetical protein LOC100040351 transcript_id : XM_001474537.1

name	Cdh18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266440 GeneID:320865 MGI:1344366
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : cadherin 18 transcript_id : XM_001487793.1

name	Cdh12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56606025 CCDS:CCDS27396.1 GeneID:215654 MGI:109503
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence IEA] codon_start : 1 note : Br-cadherin product : cadherin 12 protein_id : NP_001008420.1

name	LOC100040351 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266439 GeneID:100040351
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474587.1

name	Cdh18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266441 GeneID:320865 MGI:1344366
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : cadherin 18 protein_id : XP_001487843.1 transl_except : (pos:22865386..22865388,aa:OTHER) transl_except : (pos:22865407..22865409,aa:OTHER) transl_except : (pos:22865437..22865439,aa:OTHER) transl_except : (pos:22865449..22865451,aa:OTHER) transl_except : (pos:22865494..22865496,aa:OTHER) transl_except : (pos:22865506..22865508,aa:OTHER) transl_except : (pos:22865560..22865562,aa:OTHER) transl_except : (pos:22865605..22865607,aa:OTHER) transl_except : (pos:22866684..22866686,aa:OTHER) transl_except : (pos:22866723..22866725,aa:OTHER) transl_except : (pos:22866741..22866743,aa:OTHER) transl_except : (pos:22966128..22966130,aa:OTHER) transl_except : (pos:22966248..22966250,aa:OTHER) transl_except : (pos:22966296..22966298,aa:OTHER)

clone name	MSMg01-522L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359M10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-435K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120E18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-296O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525B15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-298K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538L11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-045F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-434I05.T7 (MSMg01no434_i05.b1)	MSMg01-434I05.TJ (MSMg01no434_i05.g1)
ACC	AG526039	AG526040
length	736	733
length of high quality (start - end)	486 (38 - 523)	249 (68 - 316)
definition	CHROMAT_FILE: MSMg01no434_i05.b1 PHD_FILE: MSMg01no434_i05.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:58:57 2005	CHROMAT_FILE: MSMg01no434_i05.g1 PHD_FILE: MSMg01no434_i05.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:58:57 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTT GTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGT CCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGAT TTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTT ATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCC ATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGG AATTTTTCCCCTGTGTCTTTATCTTCAAAGCTTTTCCCCACTTTCTCCTC TATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAG ATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTA CACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTT CTTCCACTGGATGGTTTTAGCTGGCTTGTCGAACATCATGTGACCATAGG CTGTGTGGGTTAATTTCTCGGGCTTCTATTCTATTCCATTGGGCTACTTG TCTGTCTCTATTCCAATACCTATGCATTTTTTATCACCTTTTGCTCTGTT ATTAAAGCTTTTTGTCTGGTTTGGCGGATTTCCCTTATATTTTCCTTTTT TCCTTGTTCACAAAATTTTTGCCCATTCTATCGCTN	TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXTCCCGAAAATAAACCAGAAATCAAATGGTCTGCATGCCAGAATA AAGTAAACCTGATTATGTCAGCCTGGTGGAGTTTATTGTTATCCTTATTA ATATGCACGAATTGACAATGAGTCTGAGAATCTCTATCGTATTTTCCCAC TTGCCCCACTGCACACTGATCATTCCCCTGCCCTTTTATACAGACATTCA CACTTCATGTCTTCAAATCATGGATCCACCAGTTTCCTCTGAGGCCATTG TAGAAGCTGCCTGGCCTCTCCCCATCATAGTGCCTGTCACATAAAATTGA ACAAGTTACACTTTGGGATTTGATTACGCAGATGAAATAAGTCAATTTAA AAACAATAGGTGTAAGGTAAATCATTATTATTTTCTTATAAAAATAGAAA TTAATATAGAACCATAAATTGCCACAAATATTTTGTTAGAATCTTCATGA AATAATATATGAGGAGATAAGTAATAACTAGAATATGAGCAGATATAAGA CATTACACATACAGAAAATGGAAGTGCCATATGCCATTAATAAATACCAA TAGAAAGTTGAAGTATGAAGAAAATAATAAAAACAGCAATTAAAATGTAG AAGAGTTTTTATCGATTAATTATTTTATTTATTTACAATGCCAATATTGC CCCCATCCCCCTCATAGAGCTCTTACTTCCCTC
quality values	Open. Hide. 28 32 32 33 32 32 28 18 19 10 9 9 19 22 39 44 59 31 31 31 30 29 21 27 11 11 11 17 12 12 12 16 10 13 14 24 24 28 47 48 57 36 36 36 36 33 33 59 59 59 33 21 9 9 9 9 9 16 12 18 18 21 24 35 43 37 47 47 50 53 59 53 44 44 36 36 36 43 43 30 22 17 19 26 34 42 54 54 68 54 57 57 57 57 57 57 50 50 57 42 32 25 26 32 42 44 57 68 68 68 68 68 68 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 59 50 50 50 50 50 50 68 68 68 68 51 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 44 44 42 42 48 48 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 57 57 50 53 53 53 57 50 59 59 59 50 46 46 30 30 16 13 10 10 10 12 17 22 28 36 27 41 41 50 50 53 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 54 54 54 57 57 57 46 59 44 47 48 57 57 57 57 57 57 59 59 59 48 48 48 59 59 59 59 59 59 57 57 57 57 54 44 59 59 59 59 59 59 57 57 57 57 57 57 57 40 40 32 32 20 23 23 36 44 57 57 57 57 44 43 43 44 57 47 48 43 59 39 39 39 47 44 47 39 35 35 35 39 59 48 54 47 44 32 28 23 37 32 43 37 43 30 30 30 37 37 36 29 29 28 31 37 39 36 36 31 32 23 23 23 23 23 24 23 28 34 28 28 31 59 34 31 28 32 37 37 35 32 32 28 28 37 37 30 43 43 39 30 28 22 13 13 18 18 20 28 28 28 28 28 37 37 34 20 20 9 9 9 9 10 19 17 9 8 8 8 10 11 11 11 16 13 12 15 15 21 19 19 12 10 10 15 18 15 10 8 8 8 6 9 10 10 8 9 11 11 11 12 17 18 25 21 22 19 8 8 8 8 9 8 8 6 7 7 7 10 14 12 14 9 10 10 14 13 15 11 8 8 8 10 11 13 8 8 8 8 8 8 12 15 13 13 10 10 13 13 13 13 16 11 11 11 10 10 10 9 9 8 8 8 8 8 8 8 11 19 10 10 8 8 10 10 11 12 12 13 14 12 9 9 10 13 13 14 11 9 9 9 10 21 19 10 10 10 17 13 13 11 12 10 13 10 10 10 9 11 11 13 13 8 8 8 8 8 8 8 7 6 8 9 8 10 13 8 8 8 17 17 16 9 9 7 8 10 11 19 15 15 10 8 10 10 8 8 10 11 11 11 11 11 12 19 15 9 9 6 6 8 8 8 8 8 8 9 8 8 8 8 8 3 0	Open. Hide. 8 8 21 19 8 8 8 19 21 59 42 41 41 39 39 39 43 37 41 44 59 44 29 27 9 9 9 9 12 10 9 10 13 18 21 32 31 31 41 37 33 36 36 36 36 33 50 50 50 47 33 27 15 9 6 6 7 7 7 6 14 14 8 6 6 8 8 15 19 33 33 33 33 33 36 53 53 53 53 53 53 57 57 57 57 57 57 57 57 57 59 53 53 50 50 50 53 54 68 68 68 68 68 68 68 68 68 59 59 48 54 54 54 53 50 57 57 57 47 48 48 57 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 68 68 68 68 68 68 68 68 57 57 54 54 57 57 57 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 48 44 35 35 35 42 42 44 48 57 57 57 57 59 68 68 68 68 68 68 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 53 53 50 50 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 41 30 15 12 12 12 15 12 11 11 11 11 17 21 32 41 50 50 50 50 53 53 57 57 57 57 59 59 59 59 59 48 48 57 57 57 57 57 57 57 57 57 54 54 54 57 57 48 48 48 48 46 44 39 32 37 42 48 57 68 68 68 68 57 57 68 59 59 54 54 54 57 57 68 57 57 59 54 54 57 57 48 48 54 59 59 42 37 37 47 44 57 54 54 50 57 57 57 57 54 54 54 57 57 57 68 68 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 59 68 59 59 43 43 47 47 43 43 43 47 59 48 48 48 48 48 59 59 59 59 59 33 33 25 33 33 43 43 59 57 57 57 57 48 48 48 59 59 59 59 59 59 59 59 41 41 41 43 37 37 39 39 39 39 41 41 47 50 59 59 48 48 48 47 47 47 47 47 39 43 36 43 43 43 48 48 43 40 34 25 22 30 30 43 37 40 37 43 43 43 43 43 43 39 31 31 31 36 36 33 37 43 37 37 28 28 28 34 31 27 18 18 25 25 23 20 20 24 28 32 24 20 24 25 23 20 25 30 30 43 39 35 28 25 30 33 37 37 33 33 30 30 27 19 18 9 9 8 8 8 13 17 22 30 25 37 37 37 32 29 31 39 31 32 31 25 14 11 10 12 12 10 10 12 9 11 11 23 20 15 12 12 12 12 15 16 10 10 10 10 10 10 14 12 18 16 12 12 12 18 18 19 19 12 11 9 8 9 9 15 15 14 14 12 10 10 11 11 14 9 10 13 27 18 25 14 16 13 12 18 18 31 22 25 10 8 6 6 6 6 6 6 9 9 10 10 12 10 10 10 12 21 11 11 9 8 8 8 8 15 10 8 8 8 8 8 10 10 10 10 18 17 21 22 10 8 8 6 7 11 10 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no434_i05.g1 MSMg01no434_i05.g1 CHROMAT_FILE:
MSMg01no434_i05.g1 PHD_FILE: MSMg01no434_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:57 2005
         (249 letters)



>mm_chr15_22262547_22263195
          Length = 649

 Score =  456 bits (236), Expect = e-133
 Identities = 245/248 (98%)
 Strand = Plus / Plus

                                                                       
Query: 2   accagaaatcaaatggtctgcatgccagaataaagtaaacctgattatgtcagcctggtg 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 accagaaatcaaatggtctgcatgccagaataaagtaaacctgattatgtcagcctggtg 261

                                                                       
Query: 62  gagtttattgttatccttattaatatgcacgaattgacaatgagtctgagaatctctatc 121
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| 
Sbjct: 262 gagtttattgttatccttattaatacgcacgaattgacaatgagtctgagaatctctatg 321

                                                                       
Query: 122 gtattttcccacttgccccactgcacactgatcattcccctgcccttttatacagacatt 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtattttcccacttgccccactgcacactgatcattcccctgcccttttatacagacatt 381

                                                                       
Query: 182 cacacttcatgtcttcaaatcatggatccaccagtttcctctgaggccattgtagaagct 241
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cacacttcatgtcttcatatcatggatccaccagtttcctctgaggccattgtagaagct 441

                   
Query: 242 gcctggcc 249
           ||||||||
Sbjct: 442 gcctggcc 449


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space:   153600
Effective search space used:   153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information