Query= MSMg01no434_o05.b1 MSMg01no434_o05.b1 CHROMAT_FILE:
MSMg01no434_o05.b1 PHD_FILE: MSMg01no434_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:26 2005
(486 letters)
>mm_chr15_24686532_24687421
Length = 890
Score = 843 bits (436), Expect = 0.0
Identities = 475/490 (96%), Gaps = 4/490 (0%)
Strand = Plus / Plus
Query: 1 ggacacttcactattatttctcaagacatttccaatgtaaaaccattgagaccttccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggacacttcactattatttctcaagacatttccaatgtaaaaccattgagaccttccttg 260
Query: 61 tgaacttcttgtactacacctcctcctcctttgttctatacaaac----aaaaatatagg 116
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 261 tgaacttcttgtactacacctcctcctcgtttgttctatacaaacaattaaaaatatagg 320
Query: 117 cataattattcacatgcatctcaggtttatttttcttatattcctataacaggcatttct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 cataattattcacatgcatctcaggtttatttttcttatattcctataacaggcattcct 380
Query: 177 tgttgactagctggaattagttttctctaatggagtctcactaagtatacaaaccattct 236
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttgactcgctggaattagttttctctaatggagtctcactaagtatacaaaccattct 440
Query: 237 taagaccatgcctcattggtaatagatggcctacaccaaaaggctcttattttaagagta 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagaccatgcctcattggtaatagatggcctacaccaaaaggctcttattttaagagta 500
Query: 297 tatatggtaagatggccatgcttactatgttaatcctaccaatccaagagcaagagagat 356
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 tatatggtaagatggccatgcttactatattaatcctaccaatccaagagcaagagagat 560
Query: 357 ctttcaattttctgatatctttcacaatttctttcctctgatactgaccatacttgccat 416
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 561 ctttcaattttctgatatctttcacaatatctttcctctgagactgaccatacttgccat 620
Query: 417 actgaccatttcttgccacactaaccatttacttccttggctagagttacaccgaggcac 476
|||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct: 621 actgaccatttcttgccacactgaccatttacttccttggatagagttacaccaaggtat 680
Query: 477 tttatataat 486
||||||||||
Sbjct: 681 tttatataat 690
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 890
Length adjustment: 10
Effective length of query: 476
Effective length of database: 880
Effective search space: 418880
Effective search space used: 418880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_o05.g1 MSMg01no434_o05.g1 CHROMAT_FILE:
MSMg01no434_o05.g1 PHD_FILE: MSMg01no434_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:26 2005
(245 letters)
>mm_chr15_24844842_24845486
Length = 645
Score = 393 bits (203), Expect = e-114
Identities = 228/245 (93%), Gaps = 14/245 (5%)
Strand = Plus / Minus
Query: 1 agtgggaatagaagttcttcggattgctcctgtgtggttcaggatccaggtaacacacaa 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agtggaaatagaagttcttcggattgctcctgtgtggttcaggatccaggtaacacacaa 487
Query: 61 tacaggtcacacaatgcaggtcacacagcctttttttttttttttttttttttttggaaa 120
||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 486 tacaggtcacacaatgcagctcacacagcc--------------tttttttttttggaaa 441
Query: 121 cttcaggacatcctgtcttggactcttgggttgggctttctggttaattctcacatgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cttcaggacatcctgtcttggactcttgggttgggctttctggttaattctcacatgttc 381
Query: 181 aaggcattttcccaaattgcaagcaagatgaatggtagggaattcagccatagtaactta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 380 aaggcattttcccaaattgcaagcaagatgaatggtagggaattcagccatagcaactta 321
Query: 241 ttttc 245
|||||
Sbjct: 320 ttttc 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
