Query= MSMg01no435_c22.b1 MSMg01no435_c22.b1 CHROMAT_FILE:
MSMg01no435_c22.b1 PHD_FILE: MSMg01no435_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:49 2005
(456 letters)
>mm_chr15_42142517_42143372
Length = 856
Score = 806 bits (417), Expect = 0.0
Identities = 438/451 (97%), Gaps = 10/451 (2%)
Strand = Plus / Plus
Query: 6 gaattcattgatcgttccataaaacgaattccccagggcatggttttcctttctttcttt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcattgatcgttccataaaacgaattccccagggcatggttttcctttctttcttt 265
Query: 66 ctcactcaccttcaataagcttcagtctgccctccaatctggtgattcttgatgcagttt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctcactcaccttcaataagcttcagtctgccctccaatctggtgattcttgatgcagttt 325
Query: 126 gttcagaaagtgtgggtttctgatgtagttatcacttttaacatgaggataagtgtctgt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gttcagaaagtgtgggtttctgatgtagttatcacttttaacatgaggataagtgtctgt 385
Query: 186 gtatgccgcagctgttcagctgtcatatggtacacagatgacaggaaccctccatttccc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtatgccgcagctgttcagctgtcatatggtacacagatgacaggaaccctccatttccc 445
Query: 246 acagtcacctcacagaagtgttttttcaaatgttgactacaaagacattttcccaaagca 305
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 446 acagtcacctcacagaagtgttttttcaaatgttgacaacaaagacattttcccaaagca 505
Query: 306 gtatgtccttcataaatctcaacttttcctccttaagaatttctctaaactttttctttt 365
||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 506 gtatgtccttcataaatctcagcttttcctc----------tctctaaactttttctttt 555
Query: 366 actggaaaaataaaagggagaaacaaaaatgttatctaaaatgttgaaaagaagaagggg 425
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 556 actggaaaaataaaagggagaaacaaaaacgttatctaaaatgttgaaaagaagaagggg 615
Query: 426 ttgttttcaaacagtgtaaagatgtaaccct 456
|||||||||||||||||||||||||||||||
Sbjct: 616 ttgttttcaaacagtgtaaagatgtaaccct 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_c22.g1 MSMg01no435_c22.g1 CHROMAT_FILE:
MSMg01no435_c22.g1 PHD_FILE: MSMg01no435_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:49 2005
(284 letters)
>mm_chr15_42305411_42306092
Length = 682
Score = 478 bits (247), Expect = e-139
Identities = 275/285 (96%), Gaps = 4/285 (1%)
Strand = Plus / Minus
Query: 1 aatgtaagagccagccacctcattacaatagggttttccagac-ttttcgttgtgtaaac 59
||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||
Sbjct: 482 aatgtaagagccagccacctcattataatagggttttccagacatttt-gttgtgtaaac 424
Query: 60 taaaagtgttctcattaggagtttaaaggaatatatattttttttcttttccctaagaga 119
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 423 taaaagtgttctcattaggagtttaaaggaatatata--ttttttcttttccctaagaga 366
Query: 120 actcctttttttccatcatgatttttacacacttcttttatttatttacatcagaaatgt 179
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 actcttttttttccatcatgatttttacacacttcttttatttatttacatcagaaatgt 306
Query: 180 tgtcccgccctcctgtgtgtcacatatgtagcagaagtctgccacgcctaatagaattct 239
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 305 tgtcctgccctcctgtgtgtcacatatgtagcagaagtctgacacgcctaatagaattct 246
Query: 240 tccacaagtatctttattcattgattcagactgattttcctacac 284
|||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 245 tccacaagtatcagtattcattgattcagactgattttcctacac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 682
Length adjustment: 9
Effective length of query: 275
Effective length of database: 673
Effective search space: 185075
Effective search space used: 185075
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
