Query= MSMg01no435_o24.b1 MSMg01no435_o24.b1 CHROMAT_FILE:
MSMg01no435_o24.b1 PHD_FILE: MSMg01no435_o24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:52 2005
(350 letters)
>mm_chr15_53570628_53571377
Length = 750
Score = 636 bits (329), Expect = 0.0
Identities = 343/349 (98%), Gaps = 4/349 (1%)
Strand = Plus / Minus
Query: 4 ggaattctttgcaagt--tcctttctttaaagatcaggtctgtgctggactctttctgtt 61
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ggaattctttgcaagtagt--tttctttaaagatcaggtctgtgctggactctttctgtt 493
Query: 62 cactagatcaaatgtttaacccagatattttattattaaggtaatgggctttcaaatcag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cactagatcaaatgtttaacccagatattttattattaaggtaatgggctttcaaatcag 433
Query: 122 agaggtgaagaagaaatgcaggagatgcctttgagccttcagcctctttttgcatttgct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 agaggtgaagaagaaatgcaggagatgcctttgagccttcagcctctttttgcatttgct 373
Query: 182 tagaatgctaaatagctaaaggaccagagtgaggccccagaatagaaatcgaaaataagg 241
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tagaatgctaaatagctaacggaccagagtgaggccccagaatagaaatcgaaaataagg 313
Query: 242 cgcatgtaaagacacagggttgtgggttttaatttaacactctacctctatcaaggggac 301
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 312 cgcatgtaaagacacagggttgcgggttttaatttaacactctacctctatcaaggggac 253
Query: 302 aatggaaatggaatagagaaagtaaggaatagcttagtttagagaaagg 350
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aatggaaatggaatagagaaagtaaggaatagcttagtttagagaaagg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_o24.g1 MSMg01no435_o24.g1 CHROMAT_FILE:
MSMg01no435_o24.g1 PHD_FILE: MSMg01no435_o24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:52 2005
(291 letters)
>mm_chr15_53428463_53429153
Length = 691
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%)
Strand = Plus / Plus
Query: 1 ctgggatccatctgtctccatcttccaattctgggttacagacaggcttagtgaagccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggatccatctgtctccatcttccaattctgggttacagacaggcttagtgaagccag 260
Query: 61 gctttttatacggatgctgggatttcaaactcagttcttcttcttgcagaaaaaattatc 120
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 261 gctttttatacggatgctgggaattcaaactcagttcttcttcttgcagaaaaaatgatc 320
Query: 121 ttacccactgagttatctccccaggccctaaagactctgtatctatatttacaaaagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacccactgagttatctccccaggccctaaagactctgtatctatatttacaaaagata 380
Query: 181 agcaaatttatatttttcagaaaaaaaagcagataaaaatatattctattcaaatgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcaaatttatatttttcagaaaaaaaagcagataaaaatatattctattcaaatgtttt 440
Query: 241 agtttttcagtattttatccagggctcccttgttgaaaagaggcttc 287
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtttttcaggattttatccagggctcccttgttgaaaagaggcttc 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
