Query= MSMg01no436_p11.b1 MSMg01no436_p11.b1 CHROMAT_FILE:
MSMg01no436_p11.b1 PHD_FILE: MSMg01no436_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:11 2005
(498 letters)
>mm_chr15_73970476_73971376
Length = 901
Score = 899 bits (465), Expect = 0.0
Identities = 491/501 (98%), Gaps = 3/501 (0%)
Strand = Plus / Plus
Query: 1 atgtgaggccacattattggaagctggaccacacaggagatttctgtttaacacaaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtgaggccacattattggaagctggaccacacaggagatttctgtttaacacaaccat 260
Query: 61 ggcatcgtagaacagcactatcaagccatgcagaatatctctctgacaattctttccttt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 ggcatcgtagaacagcactatcaagccatgcagaatatctccctgacaattctttccttt 320
Query: 121 t---tttttgtattcatatttttaattggcttacaaaatagtaggtttccagatcttaca 177
| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tttgtttttgtattcatatttttaattggcttacaaaatagtaggtttccagatcaaaca 380
Query: 178 gcagtttttaaaatcagacatgctaacccaacacagtccaaagatacactaatttggtac 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagtttttaaaatcagacatgctaacccaacacagtccaaagatacactaatttggtac 440
Query: 238 ttacacactgagccatgacagtacaaaaatatcaaaagtctttgttttgcgtagttgttg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttacacactgagccatgacagtacaaaaatatcaaaagtctttgttttgcgtagttgttg 500
Query: 298 tatctcagtgagagcagaatagcctgtacgatgaaaacactgaagtcacaacagaatccc 357
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 tatttcagtgagagcagaatagcctgtacaatgaaaacactgaagtcacaacagaatccc 560
Query: 358 catctgagatgaggtgtttcaggcggctttcaatgccgctgtgtggagtggctcgcggca 417
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 561 catctgagatgaggtgtttcaggcggctttgaatgccgctgtgtggagtggctcgaggca 620
Query: 418 tggcttacataaagtacgaagtgcacacaatgtgtgtccagaaccaaagcagcagtgagg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggcttacataaagtacgaagtgcacacaatgtgtgtccagaaccaaagcagcagtgagg 680
Query: 478 tcctgagatacgacacaggcc 498
|||||||||||||||||||||
Sbjct: 681 tcctgagatacgacacaggcc 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 901
Length adjustment: 10
Effective length of query: 488
Effective length of database: 891
Effective search space: 434808
Effective search space used: 434808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_p11.g1 MSMg01no436_p11.g1 CHROMAT_FILE:
MSMg01no436_p11.g1 PHD_FILE: MSMg01no436_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:11 2005
(533 letters)
>mm_chr15_74141606_74142538
Length = 933
Score = 938 bits (485), Expect = 0.0
Identities = 521/533 (97%)
Strand = Plus / Minus
Query: 1 ctcatacagtatttgggacacaatggtactggactagtatttgtcacttggacaatctgg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 733 ctcatacagtatttgggacacaatggtactggactagaatttgtcacttggacaatctgg 674
Query: 61 ggttaatctgacctaaaagaggcttggctcttggtcctcagaagctacctttttgccctt 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 673 ggttaatctgacctaaaagaggcttggctcttggtcctcagaagccacctttttgccctt 614
Query: 121 ggtttgcgcagcctgataagtgcctgattcctggagaactctgcttggccgtagctcaag 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggtttgtgcagcctgataagtgcctgattcctggagaactctgcttggccgtagctcaag 554
Query: 181 agacaagtggagaccaaggtcaggtccagctaggtggcagacccccagtaagcaccctgt 240
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 553 agacgagtggagaccaaggtcaggtccagctaggtagcagacccccagtaagcaccctgt 494
Query: 241 acctcttgtctcaggggatctcagctggctaggacccatgcctgtcatcacagggtgtca 300
||| | ||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 493 accccaagtctcaggggatctcggctggataggacccatgcctgtcatcacagggtgtca 434
Query: 301 gtaggacaaggaagctctgttagcacgagtctccagagagttcagggaagttcctgacac 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtaggacaaggaagatctgttagcacgagtctccagagagttcagggaagttcctgacac 374
Query: 361 ctgtccacggctgtaagcaccaaggctatgctgagcccaggggccccctccagcgaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctgtccacggctgtaagcaccaaggctatgctgagcccaggggccccctccagcgaggct 314
Query: 421 ctggaatgcaaggggtcctacagaccctgaacttgcagttggtgtcagaagttagccctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctggaatgcaaggggtcctacagaccctgaacttgcagttggtgtcagaagttagccctt 254
Query: 481 tggggtgcattcccgagtctcctgcatattggaggattgtgtttccattccag 533
|||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 253 tggggtgcattcccgagtctcctgcatattggaggattgtgtttccatcccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
