Query= MSMg01no438_l21.b1 MSMg01no438_l21.b1 CHROMAT_FILE:
MSMg01no438_l21.b1 PHD_FILE: MSMg01no438_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:38 2005
(397 letters)
>mm_chr15_99441454_99442249
Length = 796
Score = 681 bits (352), Expect = 0.0
Identities = 389/408 (95%), Gaps = 12/408 (2%)
Strand = Plus / Minus
Query: 1 gatgttcccagacggagaacattcagcaca-----------tctgacatcacagatctct 49
||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 637 gatgttcccagaccgagaacattcagcacatggctcatgactctgacatcacagatctct 578
Query: 50 gccctgggggtgggggtaggggggcctctgtcctgtccggaccctgtctcattgtctagg 109
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 577 gccctgggggtgggggtagggggggctctgtcctgtccagaccctgtctcattgtctagg 518
Query: 110 gttaggatgggagtctggtctttgcccgtttctggccttctccctaagagtctttacttc 169
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 517 gttaggatgggagtctggtctttgcccgtctctggccttctccctaagagtctttacttc 458
Query: 170 ttcatcggctctagtcagagctctgaaataccatgttttatttctctcctttttttttcc 229
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 457 ttcatcggccctagtcagagctctgaaataccatgttttatttctctcc-ttttttttcc 399
Query: 230 tgcccactagctgcagtctatttattaatgccatcagaatcctgtaacctcctcactgac 289
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 398 tgcccactagctgcagtctattaattaatgccatcagaatcctgtaaccttctcactgac 339
Query: 290 agtgcctggcctccacagctttgctgaacgcgactctgccctgtgaggctctctccctga 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agtgcctggcctccacagctttgctgaacgcgactctgccctgtgaggctctctccctga 279
Query: 350 gaagtgattgcagatcttgcctatgccgaccccctaccatgcctgccc 397
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gaagtgattgcagatcttgcctatgccgaccccctaccatgcctgccc 231
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 796
Length adjustment: 9
Effective length of query: 388
Effective length of database: 787
Effective search space: 305356
Effective search space used: 305356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_l21.g1 MSMg01no438_l21.g1 CHROMAT_FILE:
MSMg01no438_l21.g1 PHD_FILE: MSMg01no438_l21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:38 2005
(467 letters)
>mm_chr15_99290005_99290871
Length = 867
Score = 880 bits (455), Expect = 0.0
Identities = 464/467 (99%)
Strand = Plus / Plus
Query: 1 tctctagaccatgctggcctcgaactcagagatctacctgcctttgcctctctcctgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctagaccatgctggcctcgaactcagagatctacctgcctttgcctctctcctgagt 260
Query: 61 gctgggattgaaggtgcgcgccattgcccggcttagagtgtttgttttatgttttgtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgggattgaaggtgcgcgccattgcccggcttagagtgtttgttttatgttttgtttt 320
Query: 121 gtctctttcatgtgctcacccttatttagtaggcacagacagagcatttgtccatggcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctctttcatgtgctcacccttatttagtaggcacagacagagcatttgtccatggcct 380
Query: 181 tgccctcctggctggccctggagcacttgctattttgataggcttcaggcttcagctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgccctcctggctggccctggagcacttgctattttgataggcttcaggcttcagctgtg 440
Query: 241 aagctgtagcagcgctccacggttattttcttgggtgaggcttgctacgttttgactcgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagctgtagcagcgctccacggttattttcttgggtgaggcttgctacgttttgactcgg 500
Query: 301 ttttactattcaatttattaaaagtctgaagccccaagattgattattctccattcttag 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttactaatcaatttattaaaagtctgaagccccaagattgattattctccattcttag 560
Query: 361 tctgcatcactaatcacatccttcccttgtttgtaataagatgagctaagactccttggg 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 tctgcatcactaatgacatccttcccttgtttgtaataagatgagctaagacttcttggg 620
Query: 421 ggctggggctgtagactgctgtttacacacccgtgtgatggtgtggc 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggctggggctgtagactgctgtttacacacccgtgtgatggtgtggc 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
