XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCGAGCATCCGCGGAATTC
TATCAGATCTTCAAACAAAACCTAATACCAATACTCTTCAAACTATTCCA
CAAAATAGAAACAGAAGGAACACTACCCAATTCACTCAATGAAGCCACAA
TTACGCTTATACTTAAGCCACGCAAAGATTCAACAAAGAAACAGGACGTC
AGACCAATTTCCCTTATTAATAACGATGCAAAAATACTCAATAAAATTCT
TGAAAACTAAATCCAAGTACATATCAAAACGGTCATCCATCATGATCAAG
TCGGCTTCTAGATGCAGAGAAAGCATTTGACAAAATTCAACACCCGCCAT
GATAAAAGTCTTGAAAAGATCAGGAATTCAAGGTCCATACCTAAATGTAG
TAAAAGCAATATACAGCAAACCAGTAGCCCAACATCAACTAAACAGAGAG
AAACTTGAAGCAATCCCACTAAAATCAGGGATTAGATAAGGCTGCCCAGT
CTCTCCCTACCTATTCAATATAACACTCAAAGCCCTAGCCAGAGCAATTA
GACCACACAAAGAGGTCCAAGGGATACAAATTGGAAAGAAAGAAGCCAAA
ATACCCCCATTTGCCTATGAAACGACCGCGAACTTAAGTGACCCCCAAAA
TTTCCCCCAAAAAAATTCCAAAACTGGAAAAAAAACCCCTCTAAAGGGGT
GGGGATTAAGGTTAACTTACAAAAACAAAAATGGAAGCCTCTCTCCCACC
CCAAGAAAAAAAAGGGGTGAAAAAAAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAACTCAAGAAATGGCTTCAAAGAAATT
AAATATATGAGAAAAACGATACTCCCAGGGCCAGAGATCTCTGTATTAGT
AGCAACTGTTGGAGTTTTCCAGTTCTCCAGGTTTTCTGCTTTCTTTACGC
TCTTCTCTACCCTCAACGGATAAATTCTTTTTTGTTTGACAGAGACTATT
CCCTGGGTTAAATTAATGAAATATTGCTAGGTATTATATACATATGTATA
ATAACAGCACTTGGAGGCAGATGTTGAAGGGTTGGGGAAATTATGAGGAC
AGCCAGATCTACATAGTGCGACATCATTTTTAAAGATAGAAAGAAAGTCA
GAGGTAGAGGCAGATGTATGGATAAAAACAATGGAAGAGTAGATAGGTTT
AAAGATGCTGATAGTTTATAACTGGGTCTTTCCTTAGAGCTGCAACCTGT
AGAAAGTGCAACCTTTTGAGTCCTCTACTTTGTCACTCAAAACCTTTCTT
TATTATAGCAAAAAATTTAAGATAACTTAGTAAATAAGACTTAGGTAGAT
TGGATAATAAGTTATGTTAAATATAACTTTCCTAAAATGTTTTTGTTGAC
ACACAATATATTGGAACTTCCTGGCTAATGGTGGTTTTCCTTAATTCTAT
AATTTGTTTCCTTCCAATCGCGTTCTTTCTCATTATAAACTTCCTTACTA
TTTCTTTTTGTTT

Query= MSMg01no438_n08.g1 MSMg01no438_n08.g1 CHROMAT_FILE:
MSMg01no438_n08.g1 PHD_FILE: MSMg01no438_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:45 2005
         (423 letters)



>mm_chr15_54075462_54076283
          Length = 822

 Score =  772 bits (399), Expect = 0.0
 Identities = 417/423 (98%), Gaps = 1/423 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aactcaagaaatggcttcaaagaaattaaatatatgagaaaaacgatactcccagggcca 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 aactcaagaaatggcttcaaagaaattaaatatattagaaaaacgatactcccagggcca 260

                                                                       
Query: 61  gagatctctgtattagtagcaactgttggagttttccagttctccaggttttctgctttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagatctctgtattagtagcaactgttggagttttccagttctccaggttttctgctttc 320

                                                                       
Query: 121 tttacgctcttctctaccctcaacggataaattcttttttgtttgacagagactattccc 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tttacgctcttctctaccctcaacggataaattcttttt-gtttgacagagactattccc 379

                                                                       
Query: 181 tgggttaaattaatgaaatattgctaggtattatatacatatgtataataacagcacttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgggttaaattaatgaaatattgctaggtattatatacatatgtataataacagcacttg 439

                                                                       
Query: 241 gaggcagatgttgaagggttggggaaattatgaggacagccagatctacatagtgcgaca 300
           |||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 440 gaggcagaggcagaagggttggggaaattatgaggacagccagatctacatagtgagaca 499

                                                                       
Query: 301 tcatttttaaagatagaaagaaagtcagaggtagaggcagatgtatggataaaaacaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcatttttaaagatagaaagaaagtcagaggtagaggcagatgtatggataaaaacaatg 559

                                                                       
Query: 361 gaagagtagataggtttaaagatgctgatagtttataactgggtctttccttagagctgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaagagtagataggtttaaagatgctgatagtttataactgggtctttccttagagctgc 619

              
Query: 421 aac 423
           |||
Sbjct: 620 aac 622


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 822
Length adjustment: 9
Effective length of query: 414
Effective length of database: 813
Effective search space:   336582
Effective search space used:   336582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)