Query= MSMg01no440_b20.b1 MSMg01no440_b20.b1 CHROMAT_FILE:
MSMg01no440_b20.b1 PHD_FILE: MSMg01no440_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:26 2005
(452 letters)
>mm_chr15_53161569_53162424
Length = 856
Score = 833 bits (431), Expect = 0.0
Identities = 445/452 (98%), Gaps = 4/452 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttcctcccagcatttggaaaggaatgacaggaggatctctgtgagttgaggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttcctcccagcatttggaaaggaatgacaggaggatctctgtgagttgaggc 264
Query: 65 cagcctgcctgaatgtgtgcagtcatgagctgccttgtgcacaaccagactcaggctgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagcctgcctgaatgtgtgcagtcatgagctgccttgtgcacaaccagactcaggctgct 324
Query: 125 tggaacatcagccaagacttgttttctctccacgctttctgtttttagatgtatgttatt 184
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 tggaacatcagccaagacttgttttctcttcacgctttctgtttttagatgtatgttatt 384
Query: 185 ttatatgcatgtatgtttgccagcacgtgtgcatgtatgaactactaggtaagtgctggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttatatgcatgtatgtttgccagcacgtgtgcatgtatgaactactaggtaagtgctggg 444
Query: 245 acttgaaccaaggtcctatgtaggagtagcaagtgctctgagccactgacccatctctcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acttgaaccaaggtcctatgtaggagtagcaagtgctctgagccactgacccatctctcc 504
Query: 305 atcttcctttaaataggcatttttaagcccagagctggctatattcttatctatctcctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcttcctttaaataggcatttttaagcccagagctggctatattcttatctatctcctt 564
Query: 365 ttggttcaggaacttctgcacttaaaaaaaaaaaaaaaagaaa----tactacaggcaga 420
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 565 ttggttcaggaacttctgcacttaaaaaaaaaaaaaaaagaaagaaatactacaggcaga 624
Query: 421 atataactcactagtanagcactcattcagga 452
|||||||||| ||||| |||||||||||||||
Sbjct: 625 atataactcagtagtaaagcactcattcagga 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 856
Length adjustment: 10
Effective length of query: 442
Effective length of database: 846
Effective search space: 373932
Effective search space used: 373932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_b20.g1 MSMg01no440_b20.g1 CHROMAT_FILE:
MSMg01no440_b20.g1 PHD_FILE: MSMg01no440_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:26 2005
(450 letters)
>mm_chr15_53304350_53305199
Length = 850
Score = 855 bits (442), Expect = 0.0
Identities = 448/450 (99%)
Strand = Plus / Minus
Query: 1 catgatcagcaatatgacagtctgtggttcatcacagattgaaagttaagaagcactcgc 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 650 catgatcagcaatatgacagcctgtggttcatcacagattgaaagttaagaagcactcgc 591
Query: 61 tatggttaccctcggctttaagagtgtgcgctgatgttcatcattggctgtcacctctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tatggttaccctcggctttaagagtgtgcgctgatgttcatcattggctgtcacctctgt 531
Query: 121 ttgtttgcttttagcttgcatagcactgttccctggagaggctcttctaggccctgttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttgtttgcttttagcttgcatagcactgttccctggagaggctcttctaggccctgttga 471
Query: 181 gactacacattgaaaggcgaatcactaagcagccttggagactcccatacaagggtgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 470 gactacacattgaaaggcgaatcactaagcagccttggagactcccatagaagggtgctt 411
Query: 241 ctctctttctcttgaaaaagcttcaggcactggagaaaaaaaaagtttttttaatcattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctctctttctcttgaaaaagcttcaggcactggagaaaaaaaaagtttttttaatcattc 351
Query: 301 cttctctaaagaagagaaatcttaggtaagggtgcttttctgtaaaaggccatgttggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cttctctaaagaagagaaatcttaggtaagggtgcttttctgtaaaaggccatgttggat 291
Query: 361 tggccaacagggaactcttgacattaagtaaagtgaaatagtgcaaacaggcggagaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tggccaacagggaactcttgacattaagtaaagtgaaatagtgcaaacaggcggagaaga 231
Query: 421 atagaggagtgaatgacagaaaaaaaccgc 450
||||||||||||||||||||||||||||||
Sbjct: 230 atagaggagtgaatgacagaaaaaaaccgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
