Query= MSMg01no440_e06.b1 MSMg01no440_e06.b1 CHROMAT_FILE:
MSMg01no440_e06.b1 PHD_FILE: MSMg01no440_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:39 2005
(647 letters)
>mm_chr15_69486704_69487750
Length = 1047
Score = 1201 bits (621), Expect = 0.0
Identities = 635/640 (99%), Gaps = 2/640 (0%)
Strand = Plus / Plus
Query: 9 tcacccactttac-cggcaaagtttagcctggccaggaaatgggaatccaactatgtatg 67
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tcacccac-ttacagggcaaagtttagcctggccaggaaatgggaatccaactatgtatg 267
Query: 68 caataattttctgattcccaaagcaataaagttaaggcaggagctagctaaacactcttg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 caataattttctgattcccaaagcaataaagttaaggcaggagctagctaaacactcttg 327
Query: 128 acagtaacatacatagggtaataaatagaaaatatgtgtggctgtttcttatacttagtg 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acagtaacatacatagggtaataaatagaaaatatgtgtggctgtttcttatacttagtg 387
Query: 188 tgtaatttctattgcatttcaaataatgaaaatgtgtccaaacccagaaaatatatacat 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgtaatttctattgcatttcaaataatgaaaatgtgtccaaacccagaaaatatatacat 447
Query: 248 ctacactgtagtggttctcatagttagaaactgtatgtctaaatttgtatgggttccttg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctacactgtagtggttctcatagttagaaactgtatgtctaaatttgtatgggttccttg 507
Query: 308 aaatgacatggtctcttttcctttgtacaacacattttcttctaccattaaagttctcca 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aaatgacatggtctcttttcctttgtacaacacattttcttctaccattaaagttctcca 567
Query: 368 gataaccaaaggtgggagtgttcttggtgtctttttctactactgtaccaaaatatacta 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gataaccaaaggtgggagtgttcttggtgtctttttctactactgtaccaaaatatacta 627
Query: 428 ttccatcactgtggggaaatcagtaatcacgaactctaagaagttagtcacactgcattc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ttccatcactgtggggaaatcagtaatcacgaactctaagaagttagtcacactgcattc 687
Query: 488 actattaaaagcaaaagagaatgaattagtgaatgcatgctaggttttaggtaacctttt 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 actattaaaagcaaaagagaatgaattagtgaatgcatgctaggttttaggtaacctttt 747
Query: 548 ctactcttatacaatanaggattccctgcctacagaatggtgctacccacagtgaacagg 607
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ctactcttatacaataaaggattccctgcctacagaatggtgctacccacagtgaacagg 807
Query: 608 tttttccacctcatttaatatctttaacgttatatgcctc 647
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 808 tttttccacctcaattaatatctttaacgttatatgcctc 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_e06.g1 MSMg01no440_e06.g1 CHROMAT_FILE:
MSMg01no440_e06.g1 PHD_FILE: MSMg01no440_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:39 2005
(559 letters)
>mm_chr15_69616990_69617948
Length = 959
Score = 803 bits (415), Expect = 0.0
Identities = 433/439 (98%), Gaps = 2/439 (0%)
Strand = Plus / Minus
Query: 1 aagacagggaaagtatagaatgtgaaggtaatcaagagtcacatgtctttatgatat-tt 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 438 aagacagggaaagtatagaatgtgaaggtaatcaagagtcacatgtctttatgatatatt 379
Query: 60 cttgccagttgctgaaaggtactaatacaatgaattgagggtgaaacacttcaatacata 119
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 -ttgccaattgctgaaaggtactaatacaatgaattgagggtgaaacacttcaatacata 320
Query: 120 aataaagcacatctcatagcagtcactgttactgcagctacacagtgtccactgctacta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aataaagcacatctcatagcagtcactgttactgcagctacacagtgtccactgctacta 260
Query: 180 gttcactttatcatgaggctcacccaaacattcacagagctttcagcaagtttattttat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gttcactttatcatgaggctcacccaaacattcacagagctttcagcaagtttattttat 200
Query: 240 tttttattaattgttttattcatttacatttcaaatgatacccccctccacaaaccccta 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 199 tttttattaattgttttattcatttacatttcaaatgatacccccctccacaaaccccca 140
Query: 300 tcccatcccccatcgcccctgtccccttggagtctatgaggctccacacattcgcctaat 359
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 139 tcccatcccccatcgcccctgtccccttagagtctatgaggctccacacattcgcctaat 80
Query: 360 cctgcctcactgctttagcatccccctgcactggggcatcaagcatccacagaaccaagg 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 79 cctgcctcactgctttagcatccccctgcactggggcatcaagcaaccacagaaccaagg 20
Query: 420 gcttccactcccattgatg 438
|||||||||||||||||||
Sbjct: 19 gcttccactcccattgatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
