Query= MSMg01no443_b09.b1 MSMg01no443_b09.b1 CHROMAT_FILE:
MSMg01no443_b09.b1 PHD_FILE: MSMg01no443_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:34 2005
(328 letters)
>mm_chr15_50798798_50799525
Length = 728
Score = 576 bits (298), Expect = e-169
Identities = 320/330 (96%), Gaps = 6/330 (1%)
Strand = Plus / Plus
Query: 2 attaccttcaatgagtttatagataaagtatcttcaagaatttaagttttgacattgtga 61
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 202 attaccttcaatgagtttatagataaagtatcttcaagaagttaagttttgacattgtga 261
Query: 62 tgacacctgtcgcatatcaaatgcacaatgtctcagttaactcactgtgggattatactt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgacacctgtcgcatatcaaatgcacaatgtctcagttaactcactgtgggattatactt 321
Query: 122 ttaacaagttccctcccatttttgtgaaaccacccgcagcgaataagttgtcttactagc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttaacaagttccctcccatttttgtgaaaccacccgcagcgaataagttgtcttactagc 381
Query: 182 tctcatcactttttatgtaaagaattacagaaaaccagggatgagcataaaataatgtgt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tctcatcactttttatgtaaagaattacagaaaaccagggatgagcataaaataatgtgt 441
Query: 242 g---tttctgatttactagatactattctgtatcacatttgtgtaccttcatatacagca 298
| || | |||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 442 gcagtt---gttttactagatactattctgtatcacatttgtgtaccttcatatatagta 498
Query: 299 tcttattttattttcatatagcaagcaagg 328
||||||||||||||||||||||||||||||
Sbjct: 499 tcttattttattttcatatagcaagcaagg 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no443_b09.g1 MSMg01no443_b09.g1 CHROMAT_FILE:
MSMg01no443_b09.g1 PHD_FILE: MSMg01no443_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:34 2005
(129 letters)
>mm_chr15_50966375_50966903
Length = 529
Score = 219 bits (113), Expect = 7e-62
Identities = 125/129 (96%)
Strand = Plus / Minus
Query: 1 agcagtttaaagtctgagatttagagttcctttcctgttattggtgggagtttcataact 60
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 329 agcagtttaaagtctgagctttagagtttctttcctgttattggtgggagtttcataact 270
Query: 61 tgacgtgatttttttcctttctttgaacatggcttttccttacacacttacatagtgctt 120
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 269 tgatgtgatttttttcctttctttggacatggcttttccttacacacttacatagtgctt 210
Query: 121 tgaacatag 129
|||||||||
Sbjct: 209 tgaacatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space: 63041
Effective search space used: 63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
