Query= MSMg01no443_f15.b1 MSMg01no443_f15.b1 CHROMAT_FILE:
MSMg01no443_f15.b1 PHD_FILE: MSMg01no443_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:56 2005
(453 letters)
>mm_chr15_10171417_10172269
Length = 853
Score = 795 bits (411), Expect = 0.0
Identities = 437/453 (96%), Gaps = 12/453 (2%)
Strand = Plus / Plus
Query: 1 atgctagggtacaagctaccattgagtcaccaccctaccctgttaattataatgaataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgctagggtacaagctaccattgagtcaccaccctaccctgttaattataatgaataat 260
Query: 61 gtaactaactagcttgcaacagcttaatgtcattgaaaatatttctcagctttccattat 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 gtaactaactagcttgcaacagcttaatgtcattgcaaatatttctcagctttccattat 320
Query: 121 tattattatatactttcatatatatatatatatatatatatatatatatatgttacaaga 180
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 tattattatatactttcatatatatatatatatatatat------------gttacaaga 368
Query: 181 ttgttaaagttacaagatattgttgtattaaatgatcaatgaatgttaaaatttaccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttgttaaagttacaagatattgttgtattaaatgatcaatgaatgttaaaatttaccaaa 428
Query: 241 tatttacttttttttttttttcttattttatttatgtgagtaaattgtagctgtgttcag 300
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tatttactctggtttttttttcttattttatttatgtgagtaaattgtagctgtgttcag 488
Query: 301 acacacctaaagaggatagcagattttattacagatggctgtgagccaccatgtgattac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acacacctaaagaggatagcagattttattacagatggctgtgagccaccatgtgattac 548
Query: 361 tgggaattgaactgaggacttctggcacagcagtcagtgctcttaaccactgagccatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgggaattgaactgaggacttctggcacagcagtcagtgctcttaaccactgagccatct 608
Query: 421 ctccagccctactctgattatttttattccttc 453
|||||||||||||||||||||||||||||||||
Sbjct: 609 ctccagccctactctgattatttttattccttc 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no443_f15.g1 MSMg01no443_f15.g1 CHROMAT_FILE:
MSMg01no443_f15.g1 PHD_FILE: MSMg01no443_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:56 2005
(352 letters)
>mm_chr15_10376014_10376766
Length = 753
Score = 640 bits (331), Expect = 0.0
Identities = 348/354 (98%), Gaps = 3/354 (0%)
Strand = Plus / Minus
Query: 1 ctcatgtgaacagaaatgtacagggaaaa-taaattattttgacacatacatgtgccttt 59
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 553 ctcatgtgaacagaaatgtacagggaaaattaaattattttgacacatacatgtgccttt 494
Query: 60 ctgcttcagtgatttaatcctggagtgtctttatttactgttactttcattgtgttttgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctgcttcagtgatttaatcctggagtgtctttatttactgttactttcattgtgttttgt 434
Query: 120 aatttctcaaatcctctgatctcttttaaaaacatcacagataccttttcacacttgata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aatttctcaaatcctctgatctcttttaaaaacatcacagataccttttcacacttgata 374
Query: 180 ccatgactccagttcngtat-ataaaattctgtataggtgaccagtattcagttccatgc 238
||||||||||||||| | || ||||||||||||||||||| |||||||||||||||||||
Sbjct: 373 ccatgactccagttctg-atgataaaattctgtataggtggccagtattcagttccatgc 315
Query: 239 tactttttccttaagttcagatagagctaagtgacatacatagattggttcaagaacagt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tactttttccttaagttcagatagagctaagtgacatacatagattggttcaagaacagt 255
Query: 299 gtctctgtggttaagctgtgttgatccagttggatatactggtaatactcaatg 352
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 254 gtctctgtggttaagctgtgttgatctagttggatatactggtaatactcaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 753
Length adjustment: 9
Effective length of query: 343
Effective length of database: 744
Effective search space: 255192
Effective search space used: 255192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
