Query= MSMg01no444_c01.b1 MSMg01no444_c01.b1 CHROMAT_FILE:
MSMg01no444_c01.b1 PHD_FILE: MSMg01no444_c01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:56 2005
(373 letters)
>mm_chr16_34486125_34486898
Length = 774
Score = 638 bits (330), Expect = 0.0
Identities = 351/358 (98%), Gaps = 1/358 (0%)
Strand = Plus / Minus
Query: 15 gaattctcttaaggtctttaattattgaacttgttttgttgtaaaccaaaggagcctctt 74
||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gaattcttttaaggccattaattattgaacttgttttgttgtaaaccaaaggagcctctt 513
Query: 75 agaggggtcagctgttgca-atgcagagcgggttgggtcagcaccagtgtaaatgctgtt 133
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 agaggggtcagctgttgcagatgcagagcgggttgggtcagcaccagtgtaaatgctgtt 453
Query: 134 aatcacaggaggacctgttagctcccacttggggaagaaggtggcactctctcagcatac 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aatcacaggaggacctgttagctcccacttggggaagaaggtggcactctctcagcatac 393
Query: 194 tgctgcaaggaggatgggcaattagtggcttcagatgtcacacagcacccaccctctttg 253
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 392 tgcttcaaggaggatgggcaattagtggcttcagatgtcacacagcacccaccccctttg 333
Query: 254 gtctccctggtgctctctgttgggcaatcagaggttttagataggctctgaaaaccagtc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gtctccctggtgctctctgttgggcaatcagaggttttagataggctctgaaaaccagtc 273
Query: 314 ccatcgggggattctggtcctttgctgtttgctgaatgatgaagttcaccagctgtgg 371
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 272 ccatcgggggattctggtcctttgttgtttgctgaatgatgaagttcaccagctgtgg 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 774
Length adjustment: 9
Effective length of query: 364
Effective length of database: 765
Effective search space: 278460
Effective search space used: 278460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_c01.g1 MSMg01no444_c01.g1 CHROMAT_FILE:
MSMg01no444_c01.g1 PHD_FILE: MSMg01no444_c01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:56 2005
(250 letters)
>mm_chr15_87089903_87090552
Length = 650
Score = 412 bits (213), Expect = e-119
Identities = 232/239 (97%)
Strand = Plus / Plus
Query: 1 ccagaggcctgcacaccacataggaggccaacattgcttgttcagggtacccacaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagaggcctgcacaccacataggaggccaacattgcttgttcagggtacccacaaacaa 260
Query: 61 acaattgcctcctgcagctcttgtcttctatgtgctataaaaaggcacaactcatagtta 120
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 261 acaattgcctcctgcagctcttgtcttctatgtgctataaagaggcacagctcatagtta 320
Query: 121 cgcccgtggcttcatagacaaccatagaaaacacacaggcaagtgggtacaccttgcccc 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgcccgtggctttgtagacaaccatagaaaacacacaggcaagtgggtacaccttgcccc 380
Query: 181 tcagggaatgctgaagaagtaagttggctggtggggatgcctcttgnngcatcccacct 239
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 381 tcagggaatgctgaagaagtaagttagctggtggggatgcctcttggggcatcccacct 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
