Query= MSMg01no444_c16.b1 MSMg01no444_c16.b1 CHROMAT_FILE:
MSMg01no444_c16.b1 PHD_FILE: MSMg01no444_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:59 2005
(470 letters)
>mm_chr15_79372051_79372920
Length = 870
Score = 866 bits (448), Expect = 0.0
Identities = 462/470 (98%), Gaps = 6/470 (1%)
Strand = Plus / Plus
Query: 1 tgatgccttcttctgaactccgcaggaacctcactccatagaaataatcttttaaaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgatgccttcttctgaactccgcaggaacctcactccatagaaataatcttttaaaacac 260
Query: 61 aaaaatttgtgcaacatgatatctatcaatactaataatcaccattctaaaacattggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaatttgtgcaacatgatatctatcaatactaataatcaccattctaaaacattggga 320
Query: 121 atatagaaaattactattcaaagccaggtgtggtggcacacaactttaatcccagcactt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 atatagaaaattactattcaaagccaggtgtggtggcacacaactttaatcctagcactt 380
Query: 181 ggggtgcagaggcaggtagatctttgagctccaggacagtctgatctacatagtgagtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggggtgcagaggcaggtagatctttgagctccaggacagtctgatctacatagtgagtct 440
Query: 241 tttatcttataaaatagaaacaaaataataagttttttggactttattatcttggttgtg 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttatcttaaaaaatagaaacaaaataataagttttttggactttattatcttggttgtg 500
Query: 301 tgccagtatccatctatgtcctttttttcatgtttatttggtttccaaaatttgaactca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgccagtatccatctatgtcctttttttcatgtttatttggtttccaaaatttgaactca 560
Query: 361 agtagttcaaacactcttacccacctgactggctccatctaaattactatctttttctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtagttcaaacactcttacccacctgactggctccatctaaattactatctttttctcc 620
Query: 421 ctcttcttcttctttaaaaaaaaaaaaaaaaaaaaaagactccgttctct 470
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 ctcttcttcttctttaaaaaaaaaaaaaaaa------gactccgttctct 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_c16.g1 MSMg01no444_c16.g1 CHROMAT_FILE:
MSMg01no444_c16.g1 PHD_FILE: MSMg01no444_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:59 2005
(385 letters)
>mm_chr15_79569951_79570735
Length = 785
Score = 698 bits (361), Expect = 0.0
Identities = 379/385 (98%)
Strand = Plus / Minus
Query: 1 agtgccaagaagggttaagacatgcaacctataaattaggaaaccttgagaaaaaagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 agtgccaagaagggttaagacatgcaacctataaattaggaaaccttgagaaaaaagcta 526
Query: 61 cggaagaagcccccggagtcctaagtaaatcccaagacaggaggtagacaggggtgaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 cggaagaagcccccggagtcctaagtaaatcccaagacaggaggtagacaggggtgaggg 466
Query: 121 gagatgccctcgatcacagggctgctttgccttagtgcatagggcatctattccctcccc 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gagatgccctcaatcacagggctgctttgccttagtgcatagggcatctattccctcccc 406
Query: 181 caggacagcccccacaccttatacgttgccctgtctcccccaagtctttctttaggagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 caggacagcccccacaccttatacgttgccctgtctcccccaagtctttctttaggagag 346
Query: 241 tgtttttttcctgccccatcatgtcgagacgaagccagcgcctcactcgctactctcagg 300
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tgtccctaccctgccccatcatgtcgagacgaagccagcgcctcactcgctactctcagg 286
Query: 301 atgataacgatggcggcagcagcagcagtggtgcgagctccgtggcaggaagccagggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atgataacgatggcggcagcagcagcagtggtgcgagctccgtggcaggaagccagggca 226
Query: 361 ccgtgtttaaagacagtcctctcag 385
|||||||||||||||||||||||||
Sbjct: 225 ccgtgtttaaagacagtcctctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
