Query= MSMg01no445_c22.b1 MSMg01no445_c22.b1 CHROMAT_FILE:
MSMg01no445_c22.b1 PHD_FILE: MSMg01no445_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:18 2005
(546 letters)
>mm_chr15_29894613_29895557
Length = 945
Score = 1011 bits (523), Expect = 0.0
Identities = 540/549 (98%), Gaps = 7/549 (1%)
Strand = Plus / Plus
Query: 1 aacttttgttactataactataattctttcaaagctatctttacctggtctttctttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacttttgttactataactataattctttcaaagctatctttacctggtctttctttctg 260
Query: 61 acaagttttatcttgctgcctttgtggattttttggcaagtcaccatatccgattaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaagttttatcttgctgcctttgtggattttttggcaagtcaccatatccgattaaaga 320
Query: 121 atatgcaaagatttctctttaaacattgtaaccctgatttctggtgttcaaagggttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgcaaagatttctctttaaacattgtaaccctgatttctggtgttcaaagggttgct 380
Query: 181 atattttctacaaccctgtttgaacagaaacacatttaccattctttaccaatatttta- 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 atattttctacaaccctgtttgaacagaaacacatttaccattctttaccaata----aa 436
Query: 240 --gtgcatgcgttcataatcactgataacatacaaaggaatacaaacacagttcctgctc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aagtgcatgcgttcataatcactgataacatacaaaggaatacaaacacagttcctgctc 496
Query: 298 tgctgaactgacatctataactgacagtcttaaaagaagttagagtactttagtttctgt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgctgaactgacatctataactgacagtcttaaaagaagttagagtactttagtttctgt 556
Query: 358 agagttataaacttgacagtccatgaactgtttctaggactgctacttttagtgggtgat 417
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 557 agagttataaacttgacagtccgtgaactgtttctaggactgctacttttagtgggtgat 616
Query: 418 gaagacaataccatccgattcccattctgagtaaccaagagagattctgtccacctacac 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gaagacaataccatccgattcccattctgagtaaccaagagagattctgtccacctacac 676
Query: 478 atactggcttcattataagtttctgaacaaatgctaaagtatatttcaagagtcattccc 537
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 677 atactggcttcattataagtttctgaacaaatgctaaagtatatttcaagattcattccc 736
Query: 538 tcagctaaa 546
|||||||||
Sbjct: 737 tcagctaaa 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 945
Length adjustment: 10
Effective length of query: 536
Effective length of database: 935
Effective search space: 501160
Effective search space used: 501160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_c22.g1 MSMg01no445_c22.g1 CHROMAT_FILE:
MSMg01no445_c22.g1 PHD_FILE: MSMg01no445_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:18 2005
(258 letters)
>mm_chr15_30101789_30102446
Length = 658
Score = 449 bits (232), Expect = e-131
Identities = 250/256 (97%)
Strand = Plus / Minus
Query: 1 cacttctggttttcgcggcggcagcaacagcagcagagatgggaggaggcggctcaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cacttctggttttcgcggcggcagcaacagcagcagagatgggaggaggcggctcaggtt 397
Query: 61 gggagagggccgcgcatccccgggaacggacagcacccgagctagagcctacgtggagag 120
||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 396 gggagagggccgcgcatccccgggaacagacagcacccgagatagagcctacgcggagag 337
Query: 121 ttgattctgcggggcagatgttggtctgcaaaggggcagcgattgaggggttttagagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttgattctgcggggcagatgttggtctgcaaaggggcagcgattgaggggttttagagta 277
Query: 181 gcttgtgagttaaggagagcaccgggccagccatgcaagctagtggatgggggtggatgt 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 276 gcttgtgagttaaggagagcaccgggccagccatgaaagctagtggatgggggtggatgt 217
Query: 241 tcttgtttattctagg 256
|||||| ||||||||
Sbjct: 216 tcttgtagattctagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
