Query= MSMg01no445_k15.b1 MSMg01no445_k15.b1 CHROMAT_FILE:
MSMg01no445_k15.b1 PHD_FILE: MSMg01no445_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:57 2005
(479 letters)
>mm_chr15_32823161_32824039
Length = 879
Score = 816 bits (422), Expect = 0.0
Identities = 452/470 (96%), Gaps = 14/470 (2%)
Strand = Plus / Minus
Query: 1 attcttggtttcactgagtcacagtttataattttagtttatagtttgcagttggtttgg 60
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 attcttggttttaatgagtcacagtttataattttagtttatagtttgcagttggtttgg 404
Query: 61 atataatcatctgttcatcaaaatatttatctatgttgagtgtttattagaaaagactag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atataatcatctgttcatcaaaatatttatctatgttgagtgtttattagaaaagactag 344
Query: 121 agagttttactgatgtcccatcagggcttgttaacattatctcatgaattttacccctca 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agggttttactgatgtcccatcagggcttgttaacattatctcatgaattttacccctca 284
Query: 181 gtttaaggtaatagaatcggttcgtattcctagaggattttttgataactcacatgtttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gtttaaggtaatagaatcggttcgtattcctagaggattttttgataactcacatgtttc 224
Query: 241 ttgaataaaaatctcttgttct-------cttttttttttttttcaacttgctaatgtct 293
|||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 223 ttgaataaaaatctcttgttctcagagcac-------tttttttcaacttgctaatgtct 171
Query: 294 ctttcctaacactttctactagaacaggtcatgtccttaagttacattggctgtgtaaaa 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ctttcctaacactttctactagaacaggtcatgtccttaagttacattggctgtgtaaaa 111
Query: 354 ttaacgagagagttcttcctctccatcctggactaatttgcgttgcatcaaaaggtcatt 413
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 110 ttaacgagagagttcttcctcttcatcctggactaatttgcgttgcatcaaaaggtcatt 51
Query: 414 tctatactccccaaacccatttggactggaatctgttcaatgacagctct 463
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 tctatactccccaaacccatttggactggaatctgttcaatgacagctct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_k15.g1 MSMg01no445_k15.g1 CHROMAT_FILE:
MSMg01no445_k15.g1 PHD_FILE: MSMg01no445_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:57 2005
(467 letters)
>mm_chr15_32615794_32616660
Length = 867
Score = 872 bits (451), Expect = 0.0
Identities = 463/467 (99%)
Strand = Plus / Plus
Query: 1 ttccttcataggctacagtcatgctagatagatagattctcattctgttaaagtccaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccttcataggctacagtcatgctagatagatagattctcattctgttaaagtccaaag 260
Query: 61 acacacttcctgtagaaaactcacaggccaatcgttaccatgctcttgaagactctctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacacttcctgtagaaaactcacaggccaatcgttaccatgctcttgaagactctctga 320
Query: 121 gatcttcagaaaaaagcaaatgtgttttcattgtaataccaacaatgttcaaggggtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatcttcagaaaaaagcaaatgtgttttcattgtaataccaacaatgttcaaggggtttg 380
Query: 181 aggaaagtatctaaatctgtaagagcactaattagaaccagactgctcactgtggacaag 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaaattatctaaatctgtaagagcactaattagaaccagactgctcactgtggacaag 440
Query: 241 tttttctagaccctgacattcccaagaactaaactactatgacatctataccttggggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 tttttctagaccctgacattcccaagaactaaactactatgacatctataccttgggata 500
Query: 301 cacagtacctcctcttggctttcctttcacttggacacattgagagtcaagtagcatgtt 360
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 cgcagtacctcctcttggctttcctttcacttggacactttgagagtcaagtagcatgtt 560
Query: 361 cttctcaagagtgatatgacattggccctattccacagagttcaacatgttccacatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttctcaagagtgatatgacattggccctattccacagagttcaacatgttccacatgat 620
Query: 421 ggccgtggggcttagcagttccattcttggctgcctcctcacactgc 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggccgtggggcttagcagttccattcttggctgcctcctcacactgc 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
