Query= MSMg01no450_c14.b1 MSMg01no450_c14.b1 CHROMAT_FILE:
MSMg01no450_c14.b1 PHD_FILE: MSMg01no450_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:59 2005
(329 letters)
>mm_chr15_18673593_18674321
Length = 729
Score = 613 bits (317), Expect = e-180
Identities = 326/329 (99%)
Strand = Plus / Plus
Query: 1 ctttttctgaaagcgaaaaacacaagttgttcaccacaataatatgtgttttgatagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttttctgaaagcgaaaaacacaagttgttcaccacaataatatgtgttttgatagcta 260
Query: 61 gagacagagatcttctcaaagcagtaaagaaaatcctaaaatatttctgttaggcagctg 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 gagacagagatcttctcaaagcagtaaaggaaatcctaaaatatttctgttaggcagctg 320
Query: 121 catgttctcaaataacacatcccaacattaatttgcatttgggatatttgaagaaaaaca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 catgttctcaaataacacatcccaacattaatttgcatttgggatatttgaagagaaaca 380
Query: 181 ctaaactgtacactacatgatgatttctgaaaaaaaaatagaaaatattagcttttaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaaactgtacactacatgatgatttctgaaaaaaaaatagaaaatattagcttttaaat 440
Query: 241 tgttcttatcagattaaatgcatttggatgctcctcttcctggacaacttacctaaaaca 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttcttatcagataaaatgcatttggatgctcctcttcctggacaacttacctaaaaca 500
Query: 301 ccccagtaaacagagatgctcttattatg 329
|||||||||||||||||||||||||||||
Sbjct: 501 ccccagtaaacagagatgctcttattatg 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_c14.g1 MSMg01no450_c14.g1 CHROMAT_FILE:
MSMg01no450_c14.g1 PHD_FILE: MSMg01no450_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:59 2005
(520 letters)
>mm_chr15_18850246_18851167
Length = 922
Score = 959 bits (496), Expect = 0.0
Identities = 515/522 (98%), Gaps = 2/522 (0%)
Strand = Plus / Minus
Query: 1 ataaacttttagagggggaagctagatgataaaaacttcaatttaggagagaattaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ataaacttttagagggggaagctagatgataaaaacttcaatttaggagagaattaaagc 663
Query: 61 attttcat--tgtttcattttgtgtaatttccatgccttttaaagctgttttttgtttct 118
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 attttcattgtgtttcattttgtgtaatttccatgccttttaaagctgttttttgtttct 603
Query: 119 gtgatattcagtcaatcaatgattacattttctctgcctttcattatacacattgtagct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gtgatattcagtcaatcaatgattacattttctctgcctttcattatacacattgtagct 543
Query: 179 tccaaacacagagattgccggaatacctttcagacactcagggatcctactaatatatat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tccaaacacagagattgccggaatacctttcagacactcagggatcctactaatatatat 483
Query: 239 tttttctttttttcatgtgcaatgacaatattctgttttcacagccccaggttatggacc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tttttctttttttcatgtgcaatgacaatattctgttttcacagccccaggttatggacc 423
Query: 299 catgttttgagtggatttccatggactgattcatctttgtattacagattcctattggta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 catgttttgagtggatttccatggactgattcatctttgtattacagattcctattggta 363
Query: 359 ccgtacttggctcatacatttatgggatcagacgaacatactgtttgtattttggtctct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccgtacttggctcatacatttatgggatcagacgaacatactgtttgtattttggtctct 303
Query: 419 atctatttttacatcaccattggtaacgttaggttttattctggtactacctcaatttgc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 302 gtctatttttacatcaccattggtaacgttaggttttattctggtactacctcagtttgc 243
Query: 479 atatttttaaagattaattcttcgtggggattgctcttggct 520
|||||||||||||||||||| || |||| |||||||||||||
Sbjct: 242 atatttttaaagattaattcatcatgggaattgctcttggct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 922
Length adjustment: 10
Effective length of query: 510
Effective length of database: 912
Effective search space: 465120
Effective search space used: 465120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
