Query= MSMg01no450_e05.b1 MSMg01no450_e05.b1 CHROMAT_FILE:
MSMg01no450_e05.b1 PHD_FILE: MSMg01no450_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:07 2005
(577 letters)
>mm_chr15_36199816_36200795
Length = 980
Score = 1062 bits (549), Expect = 0.0
Identities = 572/581 (98%), Gaps = 4/581 (0%)
Strand = Plus / Minus
Query: 1 agccgacctcctctgggtagtttaatttctcagttccacatattcctcaagagatagata 60
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 690 agccgacctcctttgggtagtttaatttctcagttccacacattcctcaagagatagata 631
Query: 61 agagaatcaaggggagagagtacaaacactgaactagaggttaggaaagctgtctgacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 agagaatcaaggggagagagtacaaacactgaactagaggttaggaaagctgtctgacct 571
Query: 121 gcttctcccagttgaaatgcatt---aaaaggacagagcactggtgttcctttgcccctg 177
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 570 gcttctcccagttgaaatgcattaaaaaaaggacagagcactggtgttcctttgcccctg 511
Query: 178 ataaagctaattctctagccaggttttttaagacagtgaaagtatattcagcaggtggta 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ataaagctaattctctagccaggttttttaagacagtgaaagtatattcagcaggtggta 451
Query: 238 atttgttgtttttgtgctaaatgagaaaaagagacatttctcactttaattaacagatga 297
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 atttgttggaattgtgctaaatgagaaaaagagacatttctcactttaattaacagatga 391
Query: 298 ttggagttccttgtaacactgatgtttgagaagtgacacttttaaatgaaagcacatagt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttggagttccttgtaacactgatgtttgagaagtgacacttttaaatgaaagcacatagt 331
Query: 358 ataggtctccttacattccactctatctcaggaaccagggtcttctaatatctttagtta 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ataggtctccttacattccactctatctcaggaaccagggtcttctaatatctttagtta 271
Query: 418 ctggtccatacttccattcttagaggaacgagctcactagtagataggtagtgatatcgt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ctggtccatacttccattcttagaggaacgagctcactagtagataggtagtgatatcgt 211
Query: 478 ggaggttgcatgcattagggttttccagagaaacaggtgttacagatacacaaaaaac-t 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 210 ggaggttgcatgcattagggttttccagagaaacaggtgttacagatacacaaaaaactt 151
Query: 537 tttttttttaaagcaggaattggctaatgtagttatgaagg 577
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tttttttttaaagcaggaattggctaatgtagttatgaagg 110
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 980
Length adjustment: 10
Effective length of query: 567
Effective length of database: 970
Effective search space: 549990
Effective search space used: 549990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_e05.g1 MSMg01no450_e05.g1 CHROMAT_FILE:
MSMg01no450_e05.g1 PHD_FILE: MSMg01no450_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:07 2005
(243 letters)
>mm_chr15_36041199_36041841
Length = 643
Score = 439 bits (227), Expect = e-128
Identities = 239/243 (98%)
Strand = Plus / Plus
Query: 1 agaaataacagtaaaagacatggggagggagacttaggaagggggcacactggaaagctg 60
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 201 agaaataacagtaaaagacatggggagggaggcttaggaaggggggacactggaaagctg 260
Query: 61 agtggactgattttcagagcagtttttaaccatacaagagaaaagtctttagcttgcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtggactgattttcagagcagtttttaaccatacaagagaaaagtctttagcttgcacc 320
Query: 121 tcggagccagacaagctcctctggactgccctttcctgacttaattttctccttctgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcggagccagacaagctcctctggactgccctttcctgacttaattttctccttctgagg 380
Query: 181 gtgtcactctctcgatgttctaaaacagaccgtcttgaaggtggtgagagccagctctgt 240
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 381 gtgtcactctctcgatgttctaaaacagatcgtcctgaaggtggtgagagccagctctgt 440
Query: 241 ggt 243
|||
Sbjct: 441 ggt 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
