NNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCTGGTTGACTACTAATCAAAAAGTATAAGTGACATGAAGTA
CATAACATATACTATAGGGTGTGGCGGTGGCTTAGTGTGTAAAGAATTAA
GCTCCACAAGCAAGAAAATCTGAGTCTGAATCTCAACCGTCATATAGGAA
GTGCTTGTCTTTCACTGTGCCTATACAGTGAGATAGGAGACAACATCCCT
GCTGCCGACTACCCTAGTGCACAGCCATGAACAGGATGCAGGCTGCCTAC
TACCCTAGTGCACAGCCATGAACAGGATGCAGGCTGCCTACTACCCTAGT
GCACAGCAGTGATCAGTTTGTAGACTCTGCTTCCAACAAGGTGGAAGGCA
ATGACCGACACCTGACATTCTCTTACTTTTACATGCACACATGAATTCCT
GGTCGCATGCAAATGCACATGTACACACCTTACATCATGTCCACACACAC
ATACACACACAAATGCATCACATGCACATGCAAACACAGATAAGTTTATA
AAAGAGACAACATTTTCTAAACAGCAAGGAAAAAATGCTAACATAGAACA
TTTTGAACACAGATGAGCAGTTGCATATAGTATATAACAATTGATGAAAA
CCAATGCCCAATTTATCTAAGGAGTAAAACATTAAAAGAAAGTTCAAATA
CATCAAAAATGTTCTGTTTAAAGCAGGACAATGTTCCTTATACATGTGAA
GAATGTAAATTCT

NNCCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTAAGCCCCATT
TTTTAATGGGGTTATTTGATTTTCTAGAGTCCACCTTCTTGAGTTCTTTA
TATATATTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCT
TTCCCACTCTGTTGGTGGCCTTTTTGTCTTATTGATGGTGTCTTTTGCCT
TACAGAAGCTTTGTACTTTTATGAGATCCCATTTGTCTATTCTCGATCTT
ACAGCACAAACCATTGCTGTTCTATTCAGGAAATTTTCCCCTGTGCCCAT
ATCTTCGAGGCTTTCCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTG
GTTTTATGTGGAGTTCCTTGATCCACTTAGATATGACCTTAGTACAAGGA
GATAGGAATGGATCAATTCACATTCTTCTGCATGATAACCACCAGTTGTG
GTGCCAGCACCATTTGTTGAAAATACTATCTTTTTTCCACTGGATGGTTT
TAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCT
GGGTTTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCGCTATACCAATA
CCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTTAGGTCAGGCA
TGGTGATTCCACCAGAGTTTCTTTTATCCTTGAGAAGAGTTTTTGCTATC
CTA

Query= MSMg01no451_d12.b1 MSMg01no451_d12.b1 CHROMAT_FILE:
MSMg01no451_d12.b1 PHD_FILE: MSMg01no451_d12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:23 2005
         (665 letters)



>mm_chr15_42483035_42484099
          Length = 1065

 Score =  787 bits (407), Expect = 0.0
 Identities = 449/463 (96%)
 Strand = Plus / Plus

                                                                       
Query: 203 gctgccgactaccctagtgcacagccatgaacaggatgcaggctgcctactaccctagtg 262
           |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 403 gctgcctactaccctagtgcacagccgtgaacaggatgcaggctgcctactaccctagtg 462

                                                                       
Query: 263 cacagccatgaacaggatgcaggctgcctactaccctagtgcacagcagtgatcagtttg 322
           ||||||| ||||||||||| |||||||||| ||||||||| ||||||||||| |||| ||
Sbjct: 463 cacagccgtgaacaggatggaggctgcctagtaccctagtccacagcagtgaacagtatg 522

                                                                       
Query: 323 tagactctgcttccaacaaggtggaaggcaatgaccgacacctgacattctcttactttt 382
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 523 tagactctgcttccaacaaggtggaaggcaatgactgacacctgacattctcttactttt 582

                                                                       
Query: 383 acatgcacacatgaattcctggtcgcatgcaaatgcacatgtacacaccttacatcatgt 442
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 583 acatgcacacatgaattcctggtcgcatgcaaatgcacatgtacacaccttacatcatat 642

                                                                       
Query: 443 ccacacacacatacacacacaaatgcatcacatgcacatgcaaacacagataagtttata 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ccacacacacatacacacacaaatgcatcacatgcacatgcaaacacagataagtttata 702

                                                                       
Query: 503 aaagagacaacattttctaaacagcaaggaaaaaatgctaacatagaacattttgaacac 562
           |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 703 aaagagacaacattttctaaacagcaaggaaaaaatgctaacgtagaacattctgaacac 762

                                                                       
Query: 563 agatgagcagttgcatatagtatataacaattgatgaaaaccaatgcccaatttatctaa 622
           || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 763 aggtgagcagttgcatatagtatataacaattgatgaaaaccaatgtccaatttatctaa 822

                                                      
Query: 623 ggagtaaaacattaaaagaaagttcaaatacatcaaaaatgtt 665
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 ggagtaaaacattaaaagaaagttcaaatacatcaaaaatgtt 865


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space:   691025
Effective search space used:   691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)