Query= MSMg01no455_n21.b1 MSMg01no455_n21.b1 CHROMAT_FILE:
MSMg01no455_n21.b1 PHD_FILE: MSMg01no455_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:30 2005
(556 letters)
>mm_chr15_95474438_95475393
Length = 956
Score = 1009 bits (522), Expect = 0.0
Identities = 534/538 (99%)
Strand = Plus / Plus
Query: 19 cattaaacacaagcaagataaaccatcctgattttcacattatgactgattattagctag 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cattaaacacaagcaagataaaccatcctgattttcacattatgactgattattagctag 278
Query: 79 gagagtagggatggcccagttactagataaggggtgggttctagaaaggaaattatggcc 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gagagtagggatggcccagttactagataaggggtgggttctagaaaggaaattatggcc 338
Query: 139 aggattgccagaagagaaaagcaaatagctttaggttatccagcagcaatgttgtggcct 198
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 339 agggttgccagaagagaaaagcaaatagctttaggttgtccagcagcaatgttgtggcct 398
Query: 199 accaataggacatatctcattgcatagcacactgacaagtctaacgtcctgtgtgtatgg 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 accaataggacatatctcattgcatagcacactgacaagtctaacgtcctgtgtgtatgg 458
Query: 259 ggaacttgtgttataaacaaaataagtcaaacatgttgaagttaaactggaatccatctg 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggaacttgtgttataaacaaaataagtcaaacatgttgaagttaaactggaatccatctg 518
Query: 319 cttccaaataaccaaagttagacatttgcacacaaaactcatgagccttcagctctcttt 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cttccaaataaccaaagttagacatttgcacacaaaactcatgagccttcagctctcttt 578
Query: 379 aaccacatattatactcactcgaagaaacaaattcacaacagtgccaacacttagaacat 438
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aaccacatattatactcactcaaagaaacaaattcacaacagtgccaacacttagaacat 638
Query: 439 cagttaagtgccgatagctgatttaatgatgaagcagccctttaaaacaagtacagtaag 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 cagttaagtgccgatagctgatttaatgatgaagcagccctttaaaacaagtacagtaag 698
Query: 499 ttttaattaatgtgtattaaataccttggcttcatccgtaagtgtcccacagtcaaag 556
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 699 ttttaattaatgtgtattaaataccttggcttcatccataagtgtcccacagtcaaag 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_n21.g1 MSMg01no455_n21.g1 CHROMAT_FILE:
MSMg01no455_n21.g1 PHD_FILE: MSMg01no455_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:30 2005
(505 letters)
>mm_chr15_95609231_95610135
Length = 905
Score = 948 bits (490), Expect = 0.0
Identities = 500/504 (99%), Gaps = 2/504 (0%)
Strand = Plus / Minus
Query: 1 aagtcctctgaaagagcagccagtgttcttaaccactgagccatctcttcaacacccccc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 758 aagtcctctgaaagagcagccagtgttcttaaccactgagccatctcttcaaca--cccc 701
Query: 61 cccatttatcttcttcttaaatatatacaagtatccccaataaatgtgggccttaaatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 cccatttatcttcttcttaaatatatacaagtatccccaataaatgtgggccttaaatag 641
Query: 121 tgattagtattcagatagctgctacaacaattcttggtgtagatgccaggagaggtaaga 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 640 tgattagtattcagatagctgctacaacaatttttggtgtagatgccaggagaggtaaga 581
Query: 181 ggtagtagggatgaaacctcccttcttcatgagccagtgccaaccaacctacttctgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ggtagtagggatgaaacctcccttcttcatgagccagtgccaaccaacctacttctgtga 521
Query: 241 acccacctgccctgcagcagggtgaagccggctctgctgtggagcactgccttatcttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 acccacctgccctgcagcagggtgaagccggctctgctgtggagcactgccttatcttgc 461
Query: 301 tgaggggcagcagctcccagtttccctgatacttaggatggaaatgcaaaggatcttgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgaggggcagcagctcccagtttccctgatacttaggatggaaatgcaaaggatcttgca 401
Query: 361 aatcagttagtcaaaccgtgaggccccgttacaactctgtgtcgccatccaaagactaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aatcagttagtcaaaccgtgaggccccgttacaactctgtgtcgccatccaaagactaaa 341
Query: 421 gatttgccagcctggtcattcatctgagaggcttttagaacaccccaccctaggtgtctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gatttgccagcctggtcattcatctgagaggcttttagaacaccccaccctaggtgtctg 281
Query: 481 aggctctagctgcattgtacatta 504
|||||||||||||||| |||||||
Sbjct: 280 aggctctagctgcattatacatta 257
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
